Return to main results Retrieve Phyre Job Id

Job DescriptionP63264
Confidence46.59%DateThu Jan 5 12:08:02 GMT 2012
Rank291Aligned Residues74
% Identity9%Templated2fbia1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20... ......30.........40.. .......50.........60... ......70...
Predicted Secondary structure 


....










....




......


Query SS confidence 















. . . .


















. . . .




















. . . . . .









Query Sequence  FTITEFCLHTGISEEE. . . . LNEIVGLGVVEPREIQETT. . . . WVFDDHAAIVVQRAVRLRHEL. . . . . . ALDWPGIAVA
Query Conservation   

 
 
   


   ....

 
   


 
       ....  
      

  
 

 


......
  
  
  
Alig confidence 















....


















....




















......









Template Conservation   
  


         

  
  
   


 
     
 
   
 

  
                     
   
   
Template Sequence  MESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQL
Template Known Secondary structure  TT

TTSTT

Template Predicted Secondary structure 


















Template SS confidence 















































































   4950.........60.........70.........80.........90.........100.........110.........120........
 
   74.....80.
Predicted Secondary structure 


Query SS confidence 







Query Sequence  LTLMDDIA
Query Conservation 
 
 
   
Alig confidence 







Template Conservation     
  
 
Template Sequence  LELLNELK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   129130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions