Return to main results Retrieve Phyre Job Id

Job DescriptionP63264
Confidence99.72%DateThu Jan 5 12:08:02 GMT 2012
Rank8Aligned Residues93
% Identity19%Templated1r8ea1
SCOP infoPutative DNA-binding domain Putative DNA-binding domain DNA-binding N-terminal domain of transcription activators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30....... ..40.........50.........60.........70......
Predicted Secondary structure 








..













.........
Query SS confidence 





























. .






































. . . . . . . . .
Query Sequence  FTITEFCLHTGISEEELNEIVGLGVVEPRE. . IQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTL. . . . . . . . .
Query Conservation   

 
 
   


   

 
   


 
  ..       
      

  
 

 



  
  
  

 
.........
Alig confidence 





























..





















.















.........
Template Conservation 


 
 
   


  





  


 
   
   


 
    
  
  
  
.
  
 

 

   
           
Template Sequence  YSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSL. KYIGTPLEEMKKAQDLEMEELFAFY
Template Known Secondary structure  T

TTSS

S
TTT

TGGGG.TT

TTS
Template Predicted Secondary structure 






















.






Template SS confidence 















































































   6...10.........20.........30.........40.........50......... 60.........70.........80....
 
   77..80.........90.........100.
Predicted Secondary structure  ..........




Query SS confidence  . . . . . . . . . .
























Query Sequence  . . . . . . . . . . MDDIAHLKQENRLLRQRLSRFVAHP
Query Conservation  .......... 
    
  

  
  

 

  
 
Alig confidence  ..........
























Template Conservation        
      
      
      
      
Template Sequence  TEQERQIREKLDFLSALEQTISLVKKRMKRQMEYP
Template Known Secondary structure  S

Template Predicted Secondary structure 


Template SS confidence 


































   85....90.........100.........110.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions