Job Description P63264 Confidence 20.58% Date Thu Jan 5 12:08:02 GMT 2012 Rank 459 Aligned Residues 72 % Identity 7% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		8	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																			.	.	.	.	.	60	.
Predicted Secondary structure												.	.	.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	I	T	E	F	C	L	H	T	.	.	.	.	G	I	S	E	E	E	L	.	.	.	.	N	E	I	V	G	L	G	V	V	E	P	R	E	I	Q	E	T	T	W	V	F	D	D	H	A	A	I	V	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	V	R	L	R	H
Query Conservation												.	.	.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L	N	F	V	E
Template Known Secondary structure																																	T	S							T	T							S	S																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	L	D	W	P	G	I	A	V	A	L	T	L	M	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N	K
Template Known Secondary structure			S															T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions