Job Description P63264 Confidence 70.58% Date Thu Jan 5 12:08:02 GMT 2012 Rank 67 Aligned Residues 79 % Identity 8% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		F	T	I	T	E	F	C	L	H	T	G	I	S	E	E	E	L	N	E	I	V	.	G	L	G	V	V	E	P	R	E	I	Q	E	T	T	W	V	F	D	D	H	A	A	I	V	V	Q	R	A	V	R	L	R	H	E	L	A	L	D	W	P	G	I	A	V	A	L	T	L	M	D	D	I	A	H	L	K	Q	E
Query Conservation																							.
Alig confidence																							.																						.	.	.
Template Conservation																																													.	.	.
Template Sequence		V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	.	.	.	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	S	A	S	K	R	T	I	L	N	V
Template Known Secondary structure												T												S	G	G	G	T	T										S	S					.	.	.																						T	T			S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		87	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions