 |
Job Description | P00561 | Confidence | 89.75% | Date | Thu Jan 5 10:56:43 GMT 2012 |
Rank | 273 | Aligned Residues | 117 |
% Identity | 17% | Template | d3cuma2 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| 6-phosphogluconate dehydrogenase-like, N-terminal domain
|
Resolution | 2.20 |
|
 |
  |   |
467 | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | F | V | I | G | V | G | G | V | G | G | A | L | L | E | Q | L | K | R | Q | Q | S | W | L | K | N | K | H | I | D | L | R | V | C | G | V | A | N | S | K | A | L | L | T | N | V | H | G | L | N | L | E | N | W | Q | E | E | L | A | Q | A | K | E | P | F | N | L | G | R | L | I | R | L | V | K | E | Y | H | L |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . | . | . |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | I | A | F | I | G | L | G | H | X | G | A | P | X | A | T | N | L | L | K | A | . |
. |
. |
. |
. |
. |
. |
G | Y | L | L | N | V | F | D | L | V | Q | S | A | V | D | G | L | V | A | A | G | A | S | A | A | R | S | A | R | D | A | V | Q | G | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
| S | S |  |  |  |  |  | T | S |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
547 | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | P | V | I | V | D | C | T | S | S | Q | A | V | A | D | Q | . |
. |
. |
. |
. |
. |
. |
Y | A | D | F | L | R | E | G | F | H | V | V | T | P | N | K | K | A | N | T | S | S | M | D | Y | Y | H | Q | L | R | Y | A | A | E | K | S | R | R | K | F | L | Y | D | T | N | V | G | A | G | L | P |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
| . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|
|   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
V | V | I | S | X | L | P | A | S | Q | H | V | E | G | L | Y | L | D | D | D | G | L | L | A | H | I | A | P | G | T | L | V | L | E | C | S | . |
. |
. |
. |
T | I | A | P | T | S | A | R | K | I | H | A | A | A | R | E | R | G | L | A | X | L | . |
D | A | P | V | S | G | G | T | A |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  | S |
| T | T |
|  |  |  |  |
| S | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  | . |  |
|
|  |  | S |
|  |  |
Template Predicted Secondary structure |   |
. | . | . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|