Job Description P00561 Confidence 100.00% Date Thu Jan 5 10:56:43 GMT 2012 Rank 12 Aligned Residues 292 % Identity 31% Template d2cdqa1 SCOP info Carbamate kinase-like Carbamate kinase-like PyrH-like Resolution 2.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		M	R	V	L	K	F	G	G	T	S	V	A	N	A	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	.	.	.	.	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E	L	L	T
Query Conservation																																																												.	.	.	.
Alig confidence																																.																												.	.	.	.
Template Conservation																																.
Template Sequence		T	C	V	M	K	F	G	G	S	S	V	A	S	A	E	R	M	K	E	V	A	D	L	I	L	T	F	P	E	E	.	S	P	V	I	V	L	S	A	M	G	K	T	T	N	N	L	L	L	A	G	E	K	A	V	S	C	G	V	S	N	A	S	E	I	E	E	L	S	I	I	K	E	L	H	I	R	T	V	K
Template Known Secondary structure									T	G	G	G	S	S															T	T		.									S	T	T													T	T	T		T	T	T	G	G	G
Template Predicted Secondary structure																																.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	D	P	V	E	K	.	L	L
Query Conservation																																																																															.
Alig confidence								.	.	.	.	.	.	.	.	.																																																															.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		E	L	N	I	D	P	.	.	.	.	.	.	.	.	.	S	V	I	L	T	Y	L	E	E	L	E	Q	L	L	K	G	I	A	M	M	K	E	L	T	L	R	T	R	D	Y	L	V	S	F	G	E	C	L	S	T	R	I	F	A	A	Y	L	N	T	I	G	V	K	A	R	Q	Y	D	A	F	E	I	G	F	I
Template Known Secondary structure				T			S	.	.	.	.	.	.	.	.	.																					T																													T	T								G	G	G	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																								.	.	.																		.
Query SS confidence																								.	.	.																		.
Query Sequence		A	V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	.	.	.	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	.	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G
Query Conservation																								.	.	.																		.
Alig confidence																								.	.	.																		.
Template Conservation
Template Sequence		T	T	D	D	F	T	N	G	D	I	L	E	A	T	Y	P	A	V	A	K	R	L	Y	D	D	W	M	H	D	P	A	V	P	I	V	T	G	F	L	G	K	G	W	K	T	G	A	V	T	T	L	G	R	G	G	S	D	L	T	A	T	T	I	G	K	A	L	G	L	K	E	I	Q	V	W	K	D	V	D	G
Template Known Secondary structure				S		S	T	T			B		T	T																S								S	S					T	T	T								T	T														T		S							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	C	D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	L	H	P	R	T	I	T	P	I	A	Q	F	Q	I	P	C	L	I	K	N	T	G	N	P	Q	A	P	G	T	L	I	G	A	S	R	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T	C	D	P	T	I	Y	K	R	A	T	P	V	P	Y	L	T	F	D	E	A	A	E	L	A	Y	F	G	A	Q	V	L	H	P	Q	S	M	R	P	A	R	E	G	E	I	P	V	R	V	K	N	S	Y	N	P	K	A	P	G	T	I	I	T	K	T	R	D	M	T
Template Known Secondary structure		S	B	S	S		T	T	T		T	T			B																	S	S														T								T	T	S	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions