Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence90.16%DateThu Jan 5 10:56:43 GMT 2012
Rank271Aligned Residues93
% Identity18%Templated1j4aa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   467..470.........480.........490.........500.........510.........520...... ...530....
Predicted Secondary structure 



















............





Query SS confidence 



























































. . . . . . . . . . . .







Query Sequence  EVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELA. . . . . . . . . . . . QAKEPFNL
Query Conservation   
 
 
 
 

  
   
      
        
  
  
   
    
           ............        
Alig confidence 


















.........































............







Template Conservation   




 
 

  

  
 .........  
  
                    
 
 
   


    


  
  

 
Template Sequence  VVGVVGTGHIGQVFMQIME. . . . . . . . . GFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIN
Template Known Secondary structure 

S.........TT

SS

TT
B
S

S
S


GGGTT
BS
Template Predicted Secondary structure 



.........



























Template SS confidence 















































































   148.150.........160...... ...170.........180.........190.........200.........210........
 
   535....540.........550.........560.... .....570..
Predicted Secondary structure 












.


Query SS confidence 





























.







Query Sequence  GRLIRLVKEYHLLNPVIVDCTSSQAVADQY. ADFLREGF
Query Conservation                 



 
        
.  

  
 
Alig confidence 










....














.







Template Conservation     
  

  
.... 


 


 


  

  

  
 
Template Sequence  DESIAKMKQDV. . . . VIVNVSRGPLVDTDAVIRGLDSGK
Template Known Secondary structure  S
TT....
S
GGGB
TS
Template Predicted Secondary structure 




....










Template SS confidence 






































   219220......... 230.........240.........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions