|   |
464 | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | I | E | V | F | V | I | G | V | G | G | V | G | G | A | L | L | E | Q | L | K | R | Q | Q | S | W | L | K | N | K | H | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | R | V | C | G | V | A | N | S | K | A | L | L | T | N | V | H | G | L | N | L | E | N | W | Q | E | E | L |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |
| . | . | . |
|
|
|
|
|
|   |
|
|
|
|   |   |
Template Sequence |   |
T | E | V | R | V | A | I | V | G | V | G | N | C | A | S | S | L | V | Q | G | V | . |
. |
. |
. |
E | Y | Y | Y | N | A | D | D | T | S | T | V | P | G | L | M | H | V | R | F | G | P | Y | H | V | R | D | V | K | F | V | A | A | F | D | V | D | A | K | . |
. |
. |
K | V | G | F | D | L | S | D | A | I | F | A | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | T | T | T |
|
| T | T | S |
|
| T | T |
| S |
| S |  |  | T | T |  |  | G | G | G |  |  |  |  |  |  |  |  |
| B | T | T | . | . | . | T | T | T | S | B |  |  |  |  | T | T | S | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . |  |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
526 | . | . | . | 530 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | |
. | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | A | K | E | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | N | L | G | R | L | I | R | L | V | K | E | Y | H | L | L | N | P | V | I | V | D | C | T | S | S | Q | A | V | A | D | Q | Y | . |
A | D | F | L | R | E | G | F |
Query Conservation |   |
  |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
| . |   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |
Template Sequence |   |
E | N | N | T | I | K | I | A | D | V | A | P | T | N | V | I | V | Q | R | G | P | T | L | D | G | I | G | K | Y | Y | A | D | T | I | E | L | S | D | A | E | P | V | D | V | V | Q | A | L | K | E | A | K | V | D | V | L | V | S | Y | L | P | V | G | S | E | E | A | D | K | F | Y | A | Q | C | A | I | D | A | G | V |
Template Known Secondary structure |   |
T |
|
|
|
|
|
| S |
|
|
|
|
|
|
| B |
|  |  |
|
|
| T | T | S |
|
|  |  |  |  | T | T | S |
| B |
| S | S |
|
|
|
|  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | V | T | P | N | K | K | A | N | T | S | S | M | D | Y | Y | H | Q | L | R | Y | A | A | E | K | S | R | R | K | F | L |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|   |   |
|
|
|
|
| . | . | . | . |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
Template Sequence |   |
A | F | V | N | A | L | P | V | F | I | A | S | D | P | . |
. |
. |
. |
V | W | A | K | K | F | T | D | A | R | V | P | I | V |
Template Known Secondary structure |   |
 |  |  |  |
| S | S |
|
| S | T | T | S |  | . | . | . | . |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|  |  |
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |