Job Description P00561 Confidence 98.57% Date Thu Jan 5 10:56:43 GMT 2012 Rank 90 Aligned Residues 152 % Identity 12% Template c3q2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca Resolution 2.13 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		R	K	I	R	F	G	L	V	G	C	G	R	I	S	K	N	H	I	G	A	I	.	.	.	.	.	.	.	A	Q	H	G	D	R	A	E	L	V	E	I	C	D	T	N	P	.	.	.	.	.	.	.	.	E	A	L	Q	A	A	E	A	A	T	G	A	R	P	F	S	S	L	S	D	M	L	A	.	.	.	.
Template Known Secondary structure												S	T	T									.	.	.	.	.	.	.	T	T		T	T	T									S	S		.	.	.	.	.	.	.	.													B			S	S							.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N	L	Q	N	L	L
Query Conservation
Alig confidence		.																																	.	.																									.
Template Conservation		.																																	.	.																									.
Template Sequence		.	Q	G	N	A	D	A	L	V	L	A	T	P	S	G	L	H	P	W	Q	A	I	E	V	A	Q	A	G	R	H	V	V	S	.	.	E	K	P	M	A	T	R	W	E	D	G	K	R	M	V	K	A	C	D	E	A	G	V	R	.	L	F	V	V	K	Q	N	R	R	N	A	T	L	Q	L	V	K	K	A	I
Template Known Secondary structure		.					S						S		G	G	G											T	T						.	.		S	S	S		S	S															T			.						G	G	G	G
Template Predicted Secondary structure		.																																	.	.																									.
Template SS confidence
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		624	.	.	.			.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		N	A	G	D	.	.	E	L	M	K	F	S	G	I	L	S	G
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		E	Q	G	R	F	G	R	I	Y	M	V	T	V	N	V	F	W
Template Known Secondary structure			T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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