Job Description P00561 Confidence 99.93% Date Thu Jan 5 10:56:43 GMT 2012 Rank 30 Aligned Residues 208 % Identity 26% Template c3nwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis Resolution 2.54 Å

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		3	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		V	L	K	F	G	G	T	S	V	A	.	.	.	.	.	.	N	A	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E	L	L	T
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	K	L	G	G	E	M	F	G	G	G	Q	V	G	L	D	P	D	V	V	A	Q	V	A	R	Q	I	A	D	V	V	R	G	G	V	Q	I	A	V	V	I	G	G	G	N	F	F	R	G	A	Q	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	S	S	T	T	S	S	S																			T	T										T	T	T			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	D	P	V	E	K	L	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	E	R	T	R	S	D	Y	M	G	M	L	G	T	V	M	N	S	L	A	L	Q	D	F	L	E	K	E	G	I	V	T	R	V	Q	T	A	I	T	M	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																											T	T								S	S			.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
																																						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y	T	C	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	Q	V	A	E	P	Y	L	P	L	R	A	V	R	H	L	E	K	G	R	V	V	I	F	G	A	G	M	G	.	.	.	.	.	.	.	.	.	L	P	Y	F	S	T	D	T	T	A	A	Q	R	A	L	E	I	G	A	D	V	V	L	M	A	K	A	V	D	G	V	F	A	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	T	S														T	T							S	T	T	S	.	.	.	.	.	.	.	.	.		T	T															T		S							S	S	S	S			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
									131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.										.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	L	H	P	R	T	I	T	P	I	A	Q	F	Q	I	P	C	L	I	K	N	T	G	N	P	.	.	.	.	.	.	.	.	.	Q	A	P	G	T	L	I	G	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																.	.	.
Template Sequence		P	.	.	.	.	.	A	E	L	L	T	A	V	S	H	R	E	V	L	D	R	.	.	.	G	L	R	V	A	D	A	T	A	F	S	L	C	M	D	N	G	M	P	I	L	V	F	N	L	L	T	D	G	N	I	A	R	A	V	R	G	E	K	I	G	T	L	V	T	T
Template Known Secondary structure			.	.	.	.	.					S										T	.	.	.	T				S											T	T								S	S	S	T	T							T	T				S
Template Predicted Secondary structure			.	.	.	.	.																.	.	.
Template SS confidence
		195						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions