Job Description P00561 Confidence 98.44% Date Thu Jan 5 10:56:43 GMT 2012 Rank 102 Aligned Residues 148 % Identity 19% Template c3m2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum Resolution 2.30 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	.	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K
Query Conservation																		.
Alig confidence																		.								.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	I	K	V	G	L	V	G	I	G	A	Q	X	Q	E	N	L	L	P	S	L	L	Q	.	.	.	.	.	.	.	.	X	Q	D	I	R	I	V	A	A	C	D	S	.	.	.	.	.	.	.	.	.	.	D	L	E	R	A	R	R	V	H	R	F	I	S	D	I	P	V	L	D	N	V	P	A	X	L	N
Template Known Secondary structure												S						T							T	.	.	.	.	.	.	.	.		T	T									S	.	.	.	.	.	.	.	.	.	.	S					G	G	G	G	G	T	S		S					S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N	L	Q	N	L
Query Conservation
Alig confidence							.	.																														.	.																							.
Template Conservation							.	.																														.	.																							.
Template Sequence		Q	V	P	L	D	.	.	A	V	V	X	A	G	P	P	Q	L	H	F	E	X	G	L	L	A	X	S	K	G	V	N	V	F	V	E	K	.	.	P	P	C	A	T	L	E	E	L	E	T	L	I	D	A	A	R	R	S	D	V	V	.	S	G	V	G	X	N	F	K	F	A	R	P	V	R	Q	L	R	E	X
Template Known Secondary structure			S			S	.	.						S															T	T							S	.	.		S		S	S															T			.
Template Predicted Secondary structure							.	.																														.	.																							.
Template SS confidence
		64	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		623	.	.	.	.			.	.	630	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	N	A	G	D	.	.	E	L	M	K	F	S	G
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		T	Q	V	D	E	F	G	E	T	L	H	I	Q	L
Template Known Secondary structure			T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions