Job Description P00561 Confidence 99.95% Date Thu Jan 5 10:56:43 GMT 2012 Rank 21 Aligned Residues 219 % Identity 19% Template c3ll9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: x-ray structures of isopentenyl phosphate kinase Resolution 2.15 Å

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		3	.	.	.	.	.	.	10	.	.	.										.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		V	L	K	F	G	G	T	S	V	A	N	.	.	.	.	.	.	.	.	.	A	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	K	L	G	G	S	V	I	T	R	K	D	S	E	E	P	A	I	D	R	D	N	L	E	R	I	A	S	E	I	G	N	A	S	P	.	.	S	S	L	X	I	V	H	G	A	G	S	F	G	H	P	F	A	G	E	Y	R	I	G	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															S	S	S																					.	.	S	S								G	G	G	T								T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		L	L	T	G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	.	.	.	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	D	P
Query Conservation																																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	N	E	E	D	L	R	R	R	R	F	G	F	A	L	T	Q	N	W	V	K	K	L	N	S	H	V	C	D	A	L	L	A	E	G	I	P	A	V	S	X	Q	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S																																T	T								G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																						64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		151	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	E	K	.	L	L	A	V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V
Query Conservation					.
Alig confidence					.													.	.	.	.	.	.	.																			.
Template Conservation																		.	.	.	.	.	.	.																			.
Template Sequence		S	A	F	I	R	A	H	A	G	R	I	S	H	A	D	I	.	.	.	.	.	.	.	S	L	I	R	S	Y	L	E	E	G	X	V	P	V	V	Y	G	D	.	V	V	L	D	S	D	R	R	L	K	F	S	V	I	S	G	D	Q	L	I	N	H	F	S	L	R	L	X	P	E	R	V	I	L	G	T	D	V
Template Known Secondary structure		G	G	T					T	T								.	.	.	.	.	.	.									T	T									.				B	S		T	T	T	S																				S							S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																			.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																.	.	.	.	.
Query SS confidence																							.	.	.	.																.	.	.	.	.
Query Sequence		D	G	V	Y	T	C	D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	.	.	.	.	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	L	.	.	.	.	.	H	P	R	T	I	T	P	I	A	Q	F	Q	I	P	C	L	I	K	N	T	G	N	P	Q	A	P	G	T	L	I
Query Conservation																							.	.	.	.																.	.	.	.	.
Alig confidence																							.	.	.	.																.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	V	Y	T	R	N	P	K	K	H	P	D	A	R	L	L	D	V	I	G	X	V	G	K	I	R	E	L	L	L	L	A	E	K	G	V	E	S	E	I	I	N	A	A	V	P	G	N	I	E	R	A	L	L	G	E	.	.	.	.	.	.	.	.	.	.	.	E	V	R	G	T	R	I
Template Known Secondary structure		S	S		B	S	S		T	T	T		T	T			B		S	B				S												T	T								S	S	S	T	T								T		.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions