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Job DescriptionP00561
Confidence99.95%DateThu Jan 5 10:56:43 GMT 2012
Rank21Aligned Residues219
% Identity19%Templatec3ll9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: x-ray structures of isopentenyl phosphate kinase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.........30.........40.........50.........60.........70...
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Query Sequence  VLKFGGTSVAN. . . . . . . . . AERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAE
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Template Sequence  ILKLGGSVITRKDSEEPAIDRDNLERIASEIGNASP. . SSLXIVHGAGSFGHPFAGEYRIGSE. . . . . . . . . . . . . . . . .
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SSS



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   3......10.........20.........30........ .40.........50.........60...
 
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Query Sequence  LLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAI. . . MAGVLEARGHNVTVIDP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IENEEDLRRRRFGFALTQNWVKKLNSHVCDALLAEGIPAVSXQP
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   64.....70.........80.........90.........100.......
 
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Query Sequence  VEK. LLAVGHYLESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDV
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Template Sequence  SAFIRAHAGRISHADI. . . . . . . SLIRSYLEEGXVPVVYGD. VVLDSDRRLKFSVISGDQLINHFSLRLXPERVILGTDV
Template Known Secondary structure  GGTTT

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   108.110.........120... ......130.........140. ........150.........160.........170.........
 
   230.........240.........250 .........260..... ....270.........280.........290.....
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Query Sequence  DGVYTCDPRQVPDARLLKSMS. . . . YQEAMELSYFGAKVL. . . . . HPRTITPIAQFQIPCLIKNTGNPQAPGTLI
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Template Sequence  DGVYTRNPKKHPDARLLDVIGXVGKIRELLLLAEKGVESEIINAAVPGNIERALLGE. . . . . . . . . . . EVRGTRI
Template Known Secondary structure  SS
BSS
TTT
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   180.........190.........200.........210.........220.........230...... ...240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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