Job Description P00561 Confidence 99.93% Date Thu Jan 5 10:56:43 GMT 2012 Rank 35 Aligned Residues 225 % Identity 19% Template c3ll5C_ PDB info PDB header:transferase Chain: C: PDB Molecule:gamma-glutamyl kinase related protein; PDBTitle: crystal structure of t. acidophilum isopentenyl phosphate kinase2 product complex Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure				.														.	.	.	.	.
Query SS confidence				.														.	.	.	.	.
Query Sequence		M	R	.	V	L	K	F	G	G	T	S	V	A	N	A	E	.	.	.	.	.	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E	L
Query Conservation				.														.	.	.	.	.
Alig confidence				.														.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	X	X	I	L	K	I	G	G	S	V	I	T	D	K	S	A	Y	R	T	A	R	T	Y	A	I	R	S	I	V	K	V	L	S	G	I	E	D	L	V	C	V	V	H	G	G	G	S	F	G	H	I	K	A	X	E	F	G	L	P	G	P	K	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														B		S		S	S		S	B													T	T		T	T																			T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	T	G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	D	P	V	E	K	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	S	I	G	Y	S	I	V	H	R	D	X	E	N	L	D	L	X	V	I	D	A	X	I	E	X	G	X	R	P	I	S	V	P	I	S	A	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											T	T								G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																										65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		Y	D	G	R	F	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	I	R	Y	I	D	A	G	F	V	P	V	S	Y	G	D	V	Y	I	K	D	E	H	S	Y	G	I	Y	.	.	.	S	G	D	D	I	X	A	D	X	A	E	L	L	K	P	D	V	A	V	F	L	T	D	V	D	G	I	Y
Template Known Secondary structure		B	S	S	S	B			.	.	.	.	.	.	.	.	.	.	.	.									T	T														T	T						.	.	.																S							S	S	S	S		B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		105	.	.	.	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	C	D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	L	H	P	R	T	I	.	T	P	I	A	Q	F	Q	I	P	C	L	I	K	N	T	G	N	P	Q	A	P	G	T	L	I
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		S	K	D	P	K	R	N	P	D	A	V	L	L	R	D	I	D	T	N	G	I	G	K	K	F	E	S	X	V	K	X	K	S	S	V	K	N	G	V	Y	L	I	N	G	N	H	P	E	R	I	G	D	I	G	K	E	S	F	I	G	T	V	I
Template Known Secondary structure		S	S		T	T	T		T	T			B																			G	G	G	T		S	S							T	T	S	G	G	G	G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions