Job Description P00561 Confidence 99.81% Date Thu Jan 5 10:56:43 GMT 2012 Rank 50 Aligned Residues 236 % Identity 22% Template c3kzfC_ PDB info PDB header:transferase Chain: C: PDB Molecule:carbamate kinase; PDBTitle: structure of giardia carbamate kinase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.											.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	K	F	G	G	T	S	V	A	N	A	.	.	.	.	.	.	.	.	.	.	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	I	A	L	G	G	N	A	M	L	Q	A	K	E	K	G	D	Y	D	T	Q	R	K	N	V	E	I	A	A	S	E	I	Y	K	I	H	K	A	G	Y	K	V	V	L	T	S	G	N	G	P	Q	V	G	A	I	K	L	Q	N	Q	A	A	A	G	V	S	P	E	M	P	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	T	S		S	S																									T	T																						S	T	T	S	S							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		E	L	L	T	G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	C	G	A	M	S	Q	G	F	I	G	Y	M	M	S	Q	A	M	D	N	V	F	C	A	N	N	E	P	A	N	C	V	T	C	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																													79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
																		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	V	E	K	L	L	A	V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	.	.	.	.	K	G	E	L	V	V	L	G	R	N	G	S	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																						.	.	.	.
Template Conservation																																										.	.
Template Sequence		Q	T	L	V	D	P	K	D	Q	A	F	T	N	P	T	K	P	V	G	R	F	Y	W	R	V	V	V	P	S	P	R	P	L	E	I	V	E	Y	G	V	.	.	I	K	T	L	I	D	N	N	V	L	V	I	C	T	N	G	G	G	I	P	C	K	R	E	N	K	V	I	S	G	V	D	A	V	I	D	K	D
Template Known Secondary structure							T	T		G	G	G	G	S						S																	T	T				.	.							T	T							G	G	G	S						S	S	S						S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																										.	.	.					.	.	.
Query SS confidence																																																										.	.	.					.	.	.
Query Sequence		Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y	T	C	D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	.	.	.	L	H	P	R	.	.	.	T	I	T	P	I	A	Q	F	Q	I	P	C	L	I
Query Conservation																																																										.	.	.					.	.	.
Alig confidence																																.	.	.	.	.	.																					.	.	.					.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		L	A	T	S	L	L	A	K	T	L	N	S	D	Y	L	M	I	L	T	D	V	L	N	A	C	I	N	Y	K	R	.	.	.	.	.	.	K	L	E	E	I	K	L	S	E	I	L	A	L	E	K	D	G	H	F	A	A	G	S	M	G	P	K	V	R	A	A	I	E	F	T	Q	A	T	G	K	M	S	I	I
Template Known Secondary structure											T	T		S							S	S	S	S			S	S				.	.	.	.	.	.															T	T	T	T	T		S	S	S																S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		283	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		K	N	T	G	N	P	Q	A	.	.	.	.	.	P	G	T	L	I	G	A	S
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		T	S	L	S	T	A	V	D	A	L	N	G	K	C	G	T	R	I	I	K	D
Template Known Secondary structure				G	G	G						T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions