Job Description P00561 Confidence 96.91% Date Thu Jan 5 10:56:43 GMT 2012 Rank 161 Aligned Residues 110 % Identity 12% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	T	G	V	R	V	T	H	Q	M	L	F	N	T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A
Query Conservation
Alig confidence															.																												.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation															.																												.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		D	V	K	K	L	M	N	F	F	A	E	I	L	.	N	D	H	S	T	T	N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	.	.	.	.	.	.	.	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	.	.	.	.	.	.	.	.	.	G	K	T	T	E
Template Known Secondary structure														T	.	T		S	S										S								T	S		G	G	G	.	.	.	.	.	.	.	T	S	S										T	T	S	T	T	T	.	.	.	.	.	.	.	.	.	T	S	B		T
Template Predicted Secondary structure															.																												.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	.	.	T	A	I	L	T	V	P	S	T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	I
Template Known Secondary structure		T	S		B				G	G	G					T	S	S	S				.	.						S		G	G	G											T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions