Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence98.57%DateThu Jan 5 10:56:43 GMT 2012
Rank91Aligned Residues146
% Identity14%Templatec3ezyB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of probable dehydrogenase tm_0414 from2 thermotoga maritima
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   466...470.........480.........490.........500.........510.........520.........530.........540.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  IEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYH
Query Conservation 
 
 
 
 
 

  
   
      
        
  
  
   
    
                              
Alig confidence 




















........











..........




























Template Conservation 


 


 
  
  
   
  ........     
 

 
 ..........        
             


    
Template Sequence  LRIGVIGLGRIGTIHAENLKM. . . . . . . . IDDAILYAISDV. . . . . . . . . . REDRLREMKEKLGVEKAYKDPHELIEDPN
Template Known Secondary structure 


SGGG........
TT

S..........
T
SSS
TT
Template Predicted Secondary structure 



........





..........









Template SS confidence 















































































   1........10.........20. ........30... ......40.........50.........60..
 
   546...550.........560.........570.........580.........590.........600.........610.........620.....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNA
Query Conservation      



 
        
  

  
 






   
       

   
        





 




  
     
Alig confidence 

..


























..
























.




















Template Conservation   
.. 
 
 

   
      

  
  
  ..


 
    
   
           . 
    
  
           
Template Sequence  VD. . AVLVCSSTNTHSELVIACAKAKKHVFC. . EKPLSLNLADVDRMIEETKKADVIL. FTGFNRRFDRNFKKLKEAVEN
Template Known Secondary structure 

..
S
GGGTT
..S
S
S
TT

.
GGGG
T
Template Predicted Secondary structure 

..




..









.







Template SS confidence 















































































   63. .....70.........80.........90. ........100.........110...... ...120.........130.......
 
   626. ..630....
Predicted Secondary structure 

..
Query SS confidence 

. .






Query Sequence  GD. . ELMKFSG
Query Conservation 

.. 
  
 
Alig confidence 

..






Template Conservation 
 

 
  
  
Template Sequence  GTIGKPHVLRI
Template Known Secondary structure  TTT
S
Template Predicted Secondary structure 




Template SS confidence 










   138.140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions