Job Description P00561 Confidence 79.96% Date Thu Jan 5 10:56:43 GMT 2012 Rank 344 Aligned Residues 112 % Identity 15% Template c3dzbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus Resolution 2.46 Å

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		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		T	I	Y	I	A	G	L	G	L	I	G	G	S	L	A	L	G	I	K	R	D	.	.	.	.	.	.	.	H	P	D	Y	E	I	L	G	Y	N	R	.	.	.	.	.	.	.	.	.	.	.	S	D	Y	S	R	N	I	A	L	E	R	G	I	V	D	R	A	T	G	D	F	K	E	F	A	P	L	A	D	.
Template Known Secondary structure						S			S												T	T	.	.	.	.	.	.	.		T	T	S							S	.	.	.	.	.	.	.	.	.	.	.											T		S		S				S						G	G	G		S	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.												.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.				.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	.	.	.	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F
Query Conservation																								.	.	.
Alig confidence		.	.	.																				.	.	.												.	.	.
Template Conservation		.	.	.																																		.	.	.
Template Sequence		.	.	.	V	I	I	L	A	V	P	I	K	Q	T	X	A	Y	L	K	E	L	A	D	L	D	L	K	D	N	V	I	I	T	D	A	G	.	.	.	S	T	K	R	E	I	V	E	A	A	E	R	Y	L	T	G	K	N	V	Q	F
Template Known Secondary structure		.	.	.						S													T	T	S				T	T								.	.	.	S														T	T	S	S
Template Predicted Secondary structure		.	.	.																																		.	.	.
Template SS confidence
					66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions