Job Description P00561 Confidence 76.76% Date Thu Jan 5 10:56:43 GMT 2012 Rank 386 Aligned Residues 126 % Identity 17% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	D	D	A	T	T	G	V	R	V	T	H	Q	M	L	F	N	T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E
Query Conservation
Alig confidence																								.																						.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																						.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	T	D	G	I	G	Y	V	N	G	L	K	Q	I	Y	E	G	I	E	D	A	.	Y	I	L	I	L	G	A	G	G	A	S	K	G	I	A	N	E	L	Y	K	I	.	.	.	.	.	.	.	.	.	V	R	P	T	L	T	V	A	N	R	T	M	S	R	.	.	.	.	.	.	.	.	.	.	.	F	N
Template Known Secondary structure																	S	T	T	G	G	G		.								S												T	T	.	.	.	.	.	.	.	.	.			S							S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																								.																						.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.												.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F
Query Conservation
Alig confidence																								.	.	.	.														.	.	.																				.	.	.	.	.	.
Template Conservation																								.	.	.	.														.	.	.																				.	.	.	.	.	.
Template Sequence		N	W	S	L	N	I	N	K	I	N	L	S	H	A	E	S	H	L	D	E	F	D	.	.	.	.	I	I	I	N	T	T	P	D	S	V	I	S	L	.	.	.	N	R	L	A	S	H	T	L	V	S	D	I	V	Y	N	P	Y	K	T	.	.	.	.	.	.	P	I	L	I	E	A	E	Q	R	G	N	P	I
Template Known Secondary structure		T			S													T	G	G	G		S	.	.	.	.										S	S			.	.	.	T	T			S	S						S			S	S	S	S		.	.	.	.	.	.									T	T
Template Predicted Secondary structure																								.	.	.	.														.	.	.																				.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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