Job Description P00561 Confidence 100.00% Date Thu Jan 5 10:56:43 GMT 2012 Rank 8 Aligned Residues 318 % Identity 25% Template c3do5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution Resolution 2.20 Å

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		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		X	I	K	I	A	I	V	G	F	G	T	V	G	Q	G	V	A	E	L	L	I	R	K	R	E	E	I	E	K	A	I	G	E	F	K	V	T	A	V	A	D	S	K	S	S	I	S	G	D	.	.	F	S	L	V	E	A	L	R	X	K	R	E	T	G	X	L	R	D	D	A	K	A	I	E	V	V	R	S	A
Template Known Secondary structure											S													T																			S	S					S	S	.	.														S	S		S	B											S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N	L	Q	N	L	L	N
Query Conservation
Alig confidence					.	.																																			.	.	.																																						.
Template Conservation					.	.																																			.	.	.																																						.
Template Sequence		D	Y	D	.	.	V	L	I	E	A	S	V	T	R	E	G	V	N	Y	I	R	E	A	L	K	R	G	K	H	V	V	T	S	N	K	G	P	L	V	.	.	.	A	E	F	H	G	L	X	S	L	A	E	R	N	G	V	R	L	X	Y	E	A	T	V	G	G	A	X	P	V	V	K	L	A	K	R	Y	L	.
Template Known Secondary structure				S	.	.																				T	T	T								S					.	.	.													T	T						G	G	G	S	S	T	T	S								T	T	T	.
Template Predicted Secondary structure					.	.																																			.	.	.																																						.
Template SS confidence
		79	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.		.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	G	D	E	L	M	K	F	S	G	I	L	S	G	S	L	S	Y	I	F	G	K	L	.	D	E	G	M	S	F	S	E	A	T	T	L	A	R	E	M	G	Y	T	E	P	D	P	R	D	D	L	S	G	M	D	V	A	R	K	L	L	I	L	A	R	E	T	G	R	E	L	E	L	A	D	I	E	I	E	P
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		A	L	C	E	I	E	S	V	K	G	I	F	N	G	T	C	N	Y	I	L	S	R	X	E	E	E	R	L	P	Y	E	H	I	L	K	E	A	Q	E	L	G	Y	A	E	A	D	P	S	Y	D	V	E	G	I	D	A	A	L	K	L	V	I	I	A	N	T	I	G	V	K	A	S	Y	E	D	V	E	V	T	G
Template Known Secondary structure		T	T	S																																					T	T	S	S		S	S						T	S														T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	A	E	F	N	A	E	G	D	V	A	A	F	M	A	N	L	S	Q	L	D	D	L	F	A	A	R	V	A	K	A	R	D	E	G	K	V	L	R	Y	V	G	N	I	D	E	D	G	V	C	R	V	K	I	A	E	V	D	G	N	D	P	L	F	K	V	K	N	G	E	N	A	L	A	F	Y	S	H
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																				.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																				.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	I	T	P	E	A	F	Q	V	A	A	E	K	G	Y	T	I	R	L	I	A	E	V	.	S	R	E	K	L	K	V	S	P	R	L	V	P	F	H	H	P	L	A	.	I	K	G	T	X	N	A	A	X	F	K	T	D
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T											T	T	T										.	S	S	S											T	T	S	G	G	G	.			S	S									S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																				.
Template SS confidence
		237																						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
		784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	Q	P	L	P	L	V	L	R	G	Y	G	A	G	N	D	V	T	A	A	G	V	F	A	D	L	L	R	T	L	S
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		T	A	G	.	.	S	I	F	V	A	G	R	G	A	G	K	E	E	T	A	S	A	I	L	S	D	L	Y	E	I	Y	A
Template Known Secondary structure		S	S		.	.
Template Predicted Secondary structure					.	.
Template SS confidence
		294	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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