Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence98.64%DateThu Jan 5 10:56:43 GMT 2012
Rank81Aligned Residues152
% Identity13%Templatec3db2C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative nadph-dependent oxidoreductase; PDBTitle: crystal structure of a putative nadph-dependent oxidoreductase2 (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 a3 resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   462.......470.........480.........490.........500.........510.........520.........530.........540.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  TDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLV
Query Conservation 
   
 
 
 
 
 

  
   
      
        
  
  
   
    
                          
Alig confidence 
























........













........






















..
Template Conservation     



 


 
  
      
  ........     
 

 
   ........                   


 ..
Template Sequence  XYNPVGVAAIGLGRWAYVXADAYTK. . . . . . . . SEKLKLVTCYSRTE. . . . . . . . DKREKFGKRYNCAGDATXEALLA. .
Template Known Secondary structure 





STT........
TT
SS........T

SST..
Template Predicted Secondary structure 







........






........





..
Template SS confidence 















































































   1........10.........20..... ....30......... 40.........50.........60..
 
   542.......550.........560.........570.........580.........590.........600.........610.........620.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  KEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQN
Query Conservation          



 
        
  

  
 






   
       

   
        





 




  
  
Alig confidence  ...































..























.

















Template Conservation  ...   

 
 
 

   
      

  



  ..


 
    
   
   
      .  
    
  
     
 
Template Sequence  . . . REDVEXVIITVPNDKHAEVIEQCARSGKHIYV. . EKPISVSLDHAQRIDQVIKETGVK. FLCGHSSRRLGALRKXKE
Template Known Secondary structure  ...
TT


S
GGGTT
..SSS
SS


.
GGGGS
Template Predicted Secondary structure  ...














..









.





Template SS confidence 















































































   63......70.........80.........90.... .....100.........110........ .120.........130......
 
   622..... ..630.......
Predicted Secondary structure 


..
Query SS confidence 





. .









Query Sequence  LLNAGD. . ELMKFSGILS
Query Conservation     


.. 
  
 



Alig confidence 





..









Template Conservation   
  
 

 
  
     
Template Sequence  XIDTKEIGEVSSIEAVFS
Template Known Secondary structure  TTTT

Template Predicted Secondary structure 





Template SS confidence 

















   137..140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions