Job Description P00561 Confidence 98.32% Date Thu Jan 5 10:56:43 GMT 2012 Rank 110 Aligned Residues 122 % Identity 18% Template c3dapB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline Resolution 2.20 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	I	R	V	A	I	V	G	Y	G	N	L	G	R	S	V	E	K	L	I	A	K	.	.	.	.	.	.	.	.	Q	P	D	M	D	L	V	G	I	F	S	R	R	A	T	L	D	T	K	T	P	V	F	D	V	A	D	V	D	K	H	A	D	D	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S											T	T	.	.	.	.	.	.	.	.		S	S									S		S			S	S	S	S					G	G	G	G	G	G	G	T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.																													.
Template Conservation		.	.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	.	V	L	F	L	C	M	G	S	A	T	D	I	P	E	Q	A	P	K	F	A	Q	F	A	C	T	V	D	T	.	Y	D	N	H	R	D	I	P	R	H	R	Q	V	M	N	E	A	A	T	A	A	G	N	V	A	L	V	S	T	G	W	D	P	G	M
Template Known Secondary structure		.	.	.	.	.	.						S		T	T	T										T	T	T	S						.				G	G	G																T						S		S	B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.																													.
Template SS confidence
								61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions