Job Description P00561 Confidence 91.15% Date Thu Jan 5 10:56:43 GMT 2012 Rank 261 Aligned Residues 161 % Identity 17% Template c3cinA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:myo-inositol-1-phosphate synthase-related protein; PDBTitle: crystal structure of a myo-inositol-1-phosphate synthase-related2 protein (tm_1419) from thermotoga maritima msb8 at 1.70 a resolution Resolution 1.70 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.												.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																															.			.	.	.	.	.	.	.	.	.	.	.																																				.	.
Query SS confidence																															.			.	.	.	.	.	.	.	.	.	.	.																																				.	.
Query Sequence		I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	.	H	I	.	.	.	.	.	.	.	.	.	.	.	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	.	.
Query Conservation																															.			.	.	.	.	.	.	.	.	.	.	.																																				.	.
Alig confidence																															.			.	.	.	.	.	.	.	.	.	.	.														.	.	.																				.	.
Template Conservation																																																										.	.	.
Template Sequence		V	K	V	L	I	L	G	Q	G	Y	V	A	S	T	F	V	A	G	L	E	K	L	R	K	G	E	I	E	P	Y	G	V	P	L	A	R	E	L	P	I	G	F	E	D	I	K	I	V	G	S	Y	D	V	D	R	A	.	.	.	K	I	G	K	K	L	S	E	V	V	K	Q	Y	W	N	D	V	D	S	L	T
Template Known Secondary structure										S															T	T	S	S			T	T		T	T	T	T		S	S	S		G	G	G										B	T	T	.	.	.	T	T	T	S	B										T	T					S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
																																	532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		S	D	P	E	I	R	K	G	V	H	L	G	S	V	R	N	L	P	I	E	A	E	G	L	E	D	S	M	T	L	K	E	A	V	D	T	L	V	K	E	W	T	E	L	D	P	D	.	.	V	I	V	N	T	C	T	T	E	A	F	V	P	F	G	N	K	E	D	L	L	K	A	I	E	N	N	D	K	E	R
Template Known Secondary structure		S			B							T	T	T	T	T	T	S	S			B			G	G	G	S	S																			S	.	.															S	S										T	T		T	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
				560	.	.	.	.		.	.	.	.						.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.		.	.	.	.	.	630
Predicted Secondary structure		.	.						.					.	.	.	.	.																																																									.
Query SS confidence		.	.						.					.	.	.	.	.																																																									.
Query Sequence		.	.	V	A	D	Q	Y	.	A	D	F	L	.	.	.	.	.	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N	L	Q	N	L	L	N	.	A	G	D	E	L	M
Query Conservation		.	.						.					.	.	.	.	.																																																									.
Alig confidence		.	.						.					.	.	.	.	.																			.	.	.	.																																			.
Template Conservation																																					.	.	.	.
Template Sequence		L	T	A	T	Q	V	Y	A	Y	A	A	A	L	Y	A	N	K	R	G	G	A	A	F	V	N	V	I	P	T	F	I	A	N	D	P	.	.	.	.	A	F	V	E	L	A	K	E	N	N	L	V	V	F	G	D	D	G	A	T	G	A	T	P	F	T	A	D	V	L	S	H	L	A	Q	R	N	R	Y	V	K
Template Known Secondary structure																				T								S	S	S		S	T	T			.	.	.	.									T	T						S	S	B	S		S															T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		631	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	S	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions