Job Description P00561 Confidence 98.44% Date Thu Jan 5 10:56:43 GMT 2012 Rank 101 Aligned Residues 147 % Identity 14% Template c3c1aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (zp_00056571.1) from2 magnetospirillum magnetotacticum ms-1 at 1.85 a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		P	V	R	L	A	L	I	G	A	G	R	W	G	K	N	Y	I	R	T	I	A	G	.	.	.	.	.	.	.	.	L	P	G	A	A	L	V	R	L	A	S	S	.	.	.	.	.	.	.	.	.	.	N	P	D	N	L	A	L	V	P	P	G	C	V	I	E	S	D	W	R	S	V	V	S	.	.	.	.	.
Template Known Secondary structure											T	T	T	T		S							T	.	.	.	.	.	.	.	.		T	T									S	.	.	.	.	.	.	.	.	.	.						T	T			T	T					S							T	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N	L	Q	N	L	L	N
Query Conservation
Alig confidence																																		.	.																																		.
Template Conservation																																		.	.																																		.
Template Sequence		A	P	E	V	E	A	V	I	I	A	T	P	P	A	T	H	A	E	I	T	L	A	A	I	A	S	G	K	A	V	L	V	.	.	E	K	P	L	T	L	D	L	A	E	A	E	A	V	A	A	A	A	K	A	T	G	V	X	V	W	V	E	H	T	Q	L	F	.	N	P	A	W	E	A	L	K	A	D	L	T
Template Known Secondary structure			S	S								S		G	G	G												T						.	.		S	S	S		S																								G	G	G	G	.										T	G	G
Template Predicted Secondary structure																																		.	.																																		.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	E	L	M	K	F	S	G	I	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	G	P	I	L	A	V	R	S	E	A	G
Template Known Secondary structure		G	G		S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions