 |
Job Description | P00561 | Confidence | 99.93% | Date | Thu Jan 5 10:56:43 GMT 2012 |
Rank | 32 | Aligned Residues | 147 |
% Identity | 28% | Template | c2zhoB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:aspartokinase; |
PDBTitle: crystal structure of the regulatory subunit of aspartate2 kinase from thermus thermophilus (ligand free form)
|
Resolution | 2.98 Å |
|
 |
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | V | K | G | I | S | N | L | N | N | M | A | M | F | S | V | S | G | P | G | M | K | G | M | V | G | M | A | A | R | V | F | A | A | M | S | R | A | R | I | S | V | V | L | I | T | Q | S | S | S | E | Y | S | I | S | F | C | V | P | Q | S | D | C | V | R | A | E | R | A | M | Q | E | E | F | Y | L | E | L | K |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |
|   | . | . |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |   | . | . |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . |
Template Sequence |   |
K | A | V | T | G | V | A | L | D | L | D | H | A | Q | I | G | L | I | . |
. |
G | I | P | D | Q | P | G | I | A | A | K | V | F | Q | A | L | A | E | R | G | I | A | V | D | M | I | I | Q | . |
. |
G | V | Q | Q | M | A | F | T | V | K | K | D | F | A | Q | E | A | L | E | A | L | E | P | V | L | A | . |
. |
. |
. |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | S |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |
|  |  |  | . | . |
|
|
|  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
  |
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | L | L | E | P | L | A | V | T | E | R | L | A | I | I | S | V | V | G | D | G | M | R | T | L | R | G | I | S | A | K | F | F | A | A | L | A | R | A | N | I | N | I | V | A | I | A | Q | G | S | S | E | R | S | I | S | V | V | V | N | N | D | D | A | T | T | G | V | R | V | T | H | Q | M | L | F | N |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
|
| . | . |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |
|
Template Sequence |   |
. |
E | I | G | G | E | A | I | L | R | P | D | I | A | K | V | S | I | V | G | V | G | L | A | S | T | P | E | V | P | A | K | M | F | Q | A | V | A | S | T | G | A | N | I | E | M | I | A | . |
. |
T | S | E | V | R | I | S | V | I | I | P | A | E | Y | A | E | A | A | L | R | A | V | H | Q | A | F | E | L |
Template Known Secondary structure |   |
. |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | S | S | S | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  | . | . |  |
| S | S |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
Template Predicted Secondary structure |   |
. |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|