Job Description P00561 Confidence 97.97% Date Thu Jan 5 10:56:43 GMT 2012 Rank 125 Aligned Residues 149 % Identity 18% Template c2z2vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein ph1688; PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii Resolution 2.44 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	L	I	L	G	A	G	N	I	G	R	A	I	A	W	D	L	K	D	.	.	.	.	.	.	.	.	E	F	D	V	Y	I	G	D	V	N	N	E	N	L	E	K	V	K	E	F	A	T	.	.	.	.	.	.	.	.	.	P	L	K	V	D	A	S	N	F	D	K	L	V	E	V	M	K	E	F	E
Template Known Secondary structure										S											T	T	.	.	.	.	.	.	.	.	T	S							S									T	T	T	S		.	.	.	.	.	.	.	.	.						T	T										T	T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.			.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	.	.	V	I	E	N	L	Q	N	L	L
Query Conservation																																																																							.	.
Alig confidence		.	.	.	.																																					.	.	.	.	.																									.	.
Template Conservation		.	.	.	.																																					.	.	.	.	.
Template Sequence		.	.	.	.	L	V	I	G	A	L	P	G	F	L	G	F	K	S	I	K	A	A	I	K	S	K	V	D	M	V	D	V	S	F	M	P	E	N	P	L	.	.	.	.	.	E	L	R	D	E	A	E	K	A	Q	V	T	I	V	F	D	A	G	F	A	P	G	L	S	N	I	L	M	G	R	I	F	Q	E	L
Template Known Secondary structure		.	.	.	.																					T	T										S	S		G	G	.	.	.	.	.	G	G							T	T						S		B	T	T	T	B													S
Template Predicted Secondary structure		.	.	.	.																																					.	.	.	.	.
Template SS confidence
						64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	D	E	L	M	K	F	S	G	I	L	S	G	S	L	S
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		D	L	.	K	E	G	Y	I	Y	V	G	G	L	P	K	D	P	K
Template Known Secondary structure				.												S	S
Template Predicted Secondary structure				.
Template SS confidence
		135	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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