Job Description P00561 Confidence 91.83% Date Thu Jan 5 10:56:43 GMT 2012 Rank 254 Aligned Residues 114 % Identity 15% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		463	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	Q	V	I	E	V	F	V	I	G	V	.	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V
Query Conservation													.
Alig confidence													.															.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																												.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		D	E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	.	.	.	.	.	.	.	.	.	G	T	K	I	V	G	G	V	T	P	G	K	G	G	Q	N	V	H	G	V	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	D	T	V	K	E	A	V	K	.	.
Template Known Secondary structure			T	T							T	T	T	S													T	.	.	.	.	.	.	.	.	.	T									T	T		T	T				T	T		.	.	.	.	.	.	.	.	.	.	.	.				S	S							.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L
Query Conservation
Alig confidence		.	.	.																																									.	.
Template Conservation		.	.	.																																									.	.
Template Sequence		.	.	.	E	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	.	.	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I
Template Known Secondary structure		.	.	.																										T	T		S							S					.	.														T
Template Predicted Secondary structure		.	.	.																																									.	.
Template SS confidence
					68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions