Job Description P00561 Confidence 96.50% Date Thu Jan 5 10:56:43 GMT 2012 Rank 178 Aligned Residues 130 % Identity 18% Template c2yfqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus Resolution 2.94 Å

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		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.						.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		A	T	T	G	V	R	V	T	H	Q	M	L	F	N	T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	.	.	.	.	.	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q
Query Conservation																																																												.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		V	A	V	V	V	R	E	S	A	K	R	F	G	I	K	M	E	D	A	K	I	A	V	Q	G	F	G	N	V	G	T	F	T	V	K	N	I	E	R	Q	.	.	.	.	.	.	.	.	.	G	G	K	V	C	A	I	A	E	W	D	R	N	E	G	N	Y	A	L	Y	N	E	N	G	I	D	F	K	E	L	L
Template Known Secondary structure													T	T			G	G	G	S								S													T	.	.	.	.	.	.	.	.	.	T								B			S	S	S		S	B			B		S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.										.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Sequence		A	Y	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	T	I	I	V	P	A	A	L	E	N	V	I	T	G	E	R	A	K	T	I	N	A	K	L	V	C	E	A	A	N	G	P	T	T	P	.	.	.	.	.	.	.	E	G	D	K	V	L	T	E	R	G	I	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		S	S		S						T	T				S						S	S	S		S			.	.	.	.	.	.	.										T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270																				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.	.	.	.	.	.	.
		603	.	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	Y	D	T	N	V	G	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	P	D	I	L	T	N	S	G
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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