Job Description P00561 Confidence 99.94% Date Thu Jan 5 10:56:43 GMT 2012 Rank 25 Aligned Residues 238 % Identity 18% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		V	L	K	F	G	G	T	S	V	A	N	A	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	.	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E	L	L	T	G	L	A	A	A
Query Conservation																															.
Alig confidence																															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	K	Y	G	G	A	A	M	T	S	P	E	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	L	N	I	P	A	E	F	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T																						T	T																				T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	I	D	P	V	E	K	.	L	L	A	V	G	H	Y
Query Conservation																																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	V	T	D	A	T	T	M	E	I	V	S	M	V	L	V	G	K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B															T												T	T	S							T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		L	E	S	T	V	D	.	.	.	.	.	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y	T	C
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.																									.												.	.	.
Template Conservation																																					.												.	.	.
Template Sequence		P	N	S	A	Q	L	G	F	V	G	E	V	A	R	V	D	P	S	V	L	R	P	L	V	D	Y	G	Y	I	P	V	I	A	S	V	.	A	A	D	D	S	G	Q	A	Y	N	I	.	.	.	N	A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N
Template Known Secondary structure		T	T					B	S									G	G	G							T	T							S		.				T	T	S						.	.	.														T		S							S	S	S	S			S	S
Template Predicted Secondary structure																																					.												.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	.	.	.	.	G	A	K	V	L	H	P	R	T	I	T	P	I	A	Q	F	Q	I	P	.	C	L	I	K	N	T	G	N	P	.	.	.	.	.	.	.	.	.	.	Q	A	P	G	T	L	I	G	A	S
Query Conservation																											.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																				.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		K	E	D	.	.	.	P	S	S	L	I	K	E	I	D	I	K	G	V	K	K	M	I	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C	I	R	S	L	A	Q	G	V	K	T	A	S	I	I	D	G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I	T	G	R
Template Known Secondary structure		S	S		.	.	.	T	T	S																T	T	S	S		T	T														T	T		S							T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		224	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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