Job Description P00561 Confidence 99.51% Date Thu Jan 5 10:56:43 GMT 2012 Rank 55 Aligned Residues 234 % Identity 18% Template c2r98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		V	L	K	F	G	G	T	S	V	A	N	A	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	.	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A	E	L	L	T	G	L	A	A	A
Query Conservation																															.
Alig confidence													.																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	G	I	D	G	R	L	L	E	G	.	G	T	L	N	K	L	A	A	D	I	G	L	L	S	Q	L	G	I	R	L	V	L	I	H	G	A	Y	H	F	L	D	R	L	A	A	A	Q	G	R	T	P	H	Y	C	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G	S	S	S	.	S															T	T																				S	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A	R	G	H	N	V	T	V	.	.	.	I	D	P	V	E	K	L	L	A	V	G
Query Conservation																																																																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	V	T	D	E	T	S	L	G	Q	A	Q	Q	F	A	G	T	V	R	S	R	F	E	A	.	A	L	C	G	S	S	V	P	L	V	S	G	N	F	L	T	A	R	P	I	G	V	I	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B																						.																								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
																															84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A	A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y	T	C	D	P	R
Query Conservation
Alig confidence																																		.												.	.	.																														.	.	.	.
Template Conservation																																		.												.	.	.																														.	.	.	.
Template Sequence		T	D	X	E	Y	A	G	V	I	R	K	T	D	T	A	A	L	R	F	Q	L	D	A	G	N	I	V	W	X	P	P	L	.	G	H	S	Y	G	G	K	T	F	N	L	.	.	.	D	X	V	Q	A	A	A	S	V	A	V	S	L	Q	A	E	K	L	V	Y	L	T	L	S	D	G	I	S	R	.	.	.	.
Template Known Secondary structure					B	T	B																	T	T							S		.				T	T	S						.	.	.													T	T		S							S	S	S	S		B		.	.	.	.
Template Predicted Secondary structure																																		.												.	.	.																														.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.											290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.												.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.												.											.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	L	H	P	R	.	.	T	I	T	P	I	A	Q	F	Q	I	P	.	C	L	I	K	N	T	G	N	P	Q	.	.	.	.	.	.	.	.	.	.	A	P	G	T	L	I	G	A	S	R
Query Conservation																																.	.												.											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																													.	.												.											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	P	D	G	T	L	A	E	T	L	S	A	Q	E	A	Q	S	L	A	E	H	A	A	S	E	T	R	R	L	I	S	S	A	V	A	A	L	E	G	G	V	H	R	V	Q	I	L	N	G	A	A	D	G	S	L	L	Q	E	L	F	T	R	N	G	I	G	T	S	I	A	K	E	A
Template Known Secondary structure		.	.	T	T	S		B		S												T	T	S																	T	T		S							T	T	S	T	T								S	S	S		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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