Job Description P00561 Confidence 85.71% Date Thu Jan 5 10:56:43 GMT 2012 Rank 299 Aligned Residues 121 % Identity 17% Template c2pi1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid Resolution 2.12 Å

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		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		T	L	G	V	I	G	T	G	R	I	G	S	R	V	A	X	Y	G	L	.	.	.	.	.	.	.	.	.	A	F	G	X	K	V	L	C	Y	D	V	V	K	R	E	D	L	K	E	K	G	C	V	Y	T	S	L	D	E	L	L	K	E	S	D	V	I	S	L	H	V	P	Y	T	K	E	T	H	H	X	I	N
Template Known Secondary structure									S												.	.	.	.	.	.	.	.	.		T	T								S	S									T														S										T	T	T	T	T		B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
																				529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.															.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	L	R	E	G	F	H	V	V	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		E	E	R	I	S	L	X	K	D	G	V	Y	L	I	N	T	A	R	G	K	V	V	D	T	D	A	L	Y	R	A	Y	Q	R	G	K	F	S	G	.	L	G	L	D	V	F	E	D	E	E	I	L	I	L	K	K	Y	T	E	G	K	A	T	D	K	N	L	K	I	L	E	L	A	C	K	D	N	V	I	I	T
Template Known Secondary structure								S		T	T							S		G	G	G	B											T	T					.				S			T	T						T	T	G	G	G	G	T														T	S	T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		P	H	I	A	Y	Y	T	D	.	.	K	S	L	E	R	I	R	E	E	T	V	K	V
Template Known Secondary structure			S		T	T		S		.	.
Template Predicted Secondary structure										.	.
Template SS confidence
		293	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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