Job Description P00561 Confidence 98.56% Date Thu Jan 5 10:56:43 GMT 2012 Rank 93 Aligned Residues 163 % Identity 12% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		F	N	T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	.	.	L	G	R	L
Query Conservation																																																																												.	.
Alig confidence																					.	.	.																										.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																					.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	S	S	R	P	I	R	V	G	F	V	G	L	T	S	G	K	S	.	.	.	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	.	.	.	.	.	.	.	.	.	.	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	L
Template Known Secondary structure						S								S			S	T	T	S	.	.	.					T								T	T	T	T									S	.	.	.	.	.	.	.	.	.	.	S											T	T		T	T					S
Template Predicted Secondary structure																					.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.						.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	.	.	.	.	.	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G
Query Conservation																																							.	.	.	.	.
Alig confidence												.	.																										.	.	.	.	.						.
Template Conservation												.	.																																				.
Template Sequence		E	S	F	A	Q	Y	K	D	I	D	.	.	M	I	V	V	S	V	K	V	P	E	H	Y	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	.	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T	I	I	C	L	Q	G	R	K
Template Known Secondary structure								T	T		S	.	.						S															T	T	T	T		S	S								S	.	S	S	S	S	S													T		T	T								G	G	G	G
Template Predicted Secondary structure												.	.																																				.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	P	V	I	E	N	L	Q	N	L	L	N	A	G	D	.	.	E	L	M	K	F	S	G	I	L	S	G
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		S	P	Y	I	V	R	A	K	E	L	I	S	E	G	C	I	G	D	I	N	S	I	E	I	S	G	N	G
Template Known Secondary structure														T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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