Job Description P00561 Confidence 81.75% Date Thu Jan 5 10:56:43 GMT 2012 Rank 325 Aligned Residues 114 % Identity 14% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		463	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	Q	V	I	E	V	F	V	I	G	V	.	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	L	V
Query Conservation													.
Alig confidence													.															.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																												.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	.	.	.	.	.	.	.	.	.	G	T	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	N	T	V	R	E	A	V	A	.	.
Template Known Secondary structure			T	T							T	T	T	S														.	.	.	.	.	.	.	.	.	T									T	T		T	T				T	T		.	.	.	.	.	.	.	.	.	.	.	.				S	S							.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50													.	.	.	.	.	.	.	.	.	60	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L
Query Conservation
Alig confidence		.	.	.																																												.	.
Template Conservation		.	.	.																																												.	.
Template Sequence		.	.	.	A	T	G	A	T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	M	.	.	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I
Template Known Secondary structure		.	.	.													G	G	G											T	T																	.	.											T
Template Predicted Secondary structure		.	.	.																																												.	.
Template SS confidence
					62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions