Job Description P00561 Confidence 98.69% Date Thu Jan 5 10:56:43 GMT 2012 Rank 78 Aligned Residues 151 % Identity 15% Template c2ixaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: a-zyme, n-acetylgalactosaminidase Resolution 2.3 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.							.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	.	.	.	.	.	.	L	G	R	L
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		K	K	V	R	I	A	F	I	A	V	G	L	R	G	Q	T	H	V	E	N	M	A	R	.	.	.	.	.	.	.	.	R	D	D	V	E	I	V	A	F	A	D	P	D	P	Y	.	.	.	.	.	.	.	M	V	G	R	A	Q	E	I	L	K	K	N	G	K	K	P	A	K	V	F	G	N	G	N	D	D	Y
Template Known Secondary structure												S												T	.	.	.	.	.	.	.	.		T	T									S				.	.	.	.	.	.	.												T	T									S	S	T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E
Query Conservation
Alig confidence												.	.																									.						.																																	.
Template Conservation												.	.																									.						.																																	.
Template Sequence		K	N	M	L	K	D	K	N	I	D	.	.	A	V	F	V	S	S	P	W	E	W	H	H	E	H	G	V	A	A	M	K	A	G	K	I	.	V	G	M	E	V	.	S	G	A	I	T	L	E	E	C	W	D	Y	V	K	V	S	E	Q	T	G	V	P	L	M	A	L	E	N	V	C	Y	R	.	R	D	V	M
Template Known Secondary structure					T	T		T	T			.	.								G	G	G											T	T			.						.				S	S																							G	G	G	G		.
Template Predicted Secondary structure												.	.																									.						.																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.
		618	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		N	L	Q	N	L	L	N	A	G	D	.	.	E	L	M	K	F	S	G
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		A	I	L	N	M	V	R	K	G	M	F	G	E	L	V	H	G	T	G
Template Known Secondary structure									T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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