Job Description P00561 Confidence 99.96% Date Thu Jan 5 10:56:43 GMT 2012 Rank 17 Aligned Residues 270 % Identity 18% Template c2e9yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbamate kinase; PDBTitle: crystal structure of project ape1968 from aeropyrum pernix k1 Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.											.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	K	F	G	G	T	S	V	A	N	A	.	.	.	.	.	.	.	.	.	.	E	R	F	L	R	V	A	D	I	L	E	S	N	A	R	Q	G	Q	V	A	T	V	L	S	A	P	A	K	I	T	N	H	L	V	A	M	I	E	K	T	I	S	G	Q	D	A	L	P	N	I	S	D	A	E	R	I	F	A
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	A	L	G	G	N	A	I	A	G	P	G	M	D	V	S	V	E	S	Q	T	A	A	V	K	R	A	S	S	I	I	A	D	V	L	A	D	G	W	R	S	V	I	T	H	G	N	G	P	Q	V	G	Y	L	S	E	A	F	E	A	L	P	P	E	R	P	R	Q	P	L	Y	I	A	T	A	M	T	Q	A
Template Known Secondary structure											S	B	T	T	T	B																							T	T																						T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.													.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	T	G	L	A	A	A	Q	P	G	F	P	L	A	Q	L	K	T	F	V	D	Q	E	F	A	Q	I	K	H	V	L	H	G	I	S	L	L	G	Q	C	P	.	.	.	.	.	.	.	.	.	.	.	.	D	S	I	N	A	A	L	I	C	R	G	E	K	M	S	I	A	I	M	A	G	V	L	E	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	I	G	L	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	L	E	E	E	L	R	R	R	G	L	N	V	L	V	P	V	V	I	S	R	V	L	V	D	V	S	D	P	S	F	N	N	P	S	K	P	V	G	P	I	Y	G	R	E	E	A	E	E	L	S	R	R
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T																T	T		G	G	G	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.																				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		R	G	H	N	V	T	V	I	D	P	V	E	K	L	L	A	V	G	H	Y	L	E	S	T	V	D	I	A	E	S	T	R	R	I	A	A	S	R	I	P	A	D	H	M	V	L	M	A	G	F	T	A	G	.	.	.	.	.	N	E	K	G	E	L	V	V	L	G	R	N	G	S	D	Y	S	A	A	V	L	A
Query Conservation																																																							.	.	.	.	.
Alig confidence																																.	.	.	.																				.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		Y	G	W	V	F	K	R	D	P	R	G	G	F	R	R	V	V	P	S	P	R	P	V	S	I	V	D	R	D	L	.	.	.	.	I	A	E	A	S	A	E	S	P	A	V	V	A	L	G	G	G	G	V	P	V	V	E	R	P	G	G	V	L	E	P	V	E	A	V	V	D	K	D	L	A	S	S	L	L	A
Template Known Secondary structure										T	T	S	S														T	T				.	.	.	.									S						G	G	G								T	T	S						S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.					.	.	.
Query SS confidence																																																			.	.	.					.	.	.
Query Sequence		A	C	L	R	A	D	C	C	E	I	W	T	D	V	D	G	V	Y	T	C	D	P	R	Q	V	P	D	A	R	L	L	K	S	M	S	Y	Q	E	A	M	E	L	S	Y	F	G	A	K	V	.	.	.	L	H	P	R	.	.	.	T	I	T	P	I	A	Q	F	Q	I	P	C	L	I	K	N	T	G	N	P	Q
Query Conservation																																																			.	.	.					.	.	.
Alig confidence																									.	.																									.	.	.					.	.	.
Template Conservation																									.	.
Template Sequence		T	Q	L	N	A	D	L	L	V	I	L	T	D	V	P	G	V	A	V	N	Y	G	R	.	.	E	G	E	R	W	L	R	R	A	A	A	S	E	L	K	K	Y	L	R	E	G	H	F	P	P	G	S	M	G	P	K	V	E	A	A	I	S	F	V	E	R	T	G	K	P	A	V	I	G	S	L	E	E	A	R
Template Known Secondary structure				T	T		S							S	S	S	S				T	T	T	S	.	.	T	T					S													T	T		S		T	T	T																	S							S	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		290						.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		A	.	.	.	.	.	P	G	T	L	I	G	A
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		Q	V	L	S	L	Q	A	G	T	V	V	M	L
Template Known Secondary structure					T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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