Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence64.83%DateThu Jan 5 10:56:43 GMT 2012
Rank467Aligned Residues121
% Identity13%Templatec2duwA_
PDB info PDB header:ligand binding proteinChain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470... ......480.........490.........500.........510.........520.........530..
Predicted Secondary structure 








....






















Query SS confidence 
















. . . .


























































Query Sequence  QMLFNTDQVIEVFVIGV. . . . GGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPF
Query Conservation    

 
   
 
 
 
 ....
 

  
   
      
        
  
  
   
    
                 
Alig confidence 







..






....













.......


...
















...............
Template Conservation     
  

..







    
 
  
   
   .......
  ...
 



      
 
  ...............
Template Sequence  AGILTSTR. . TIALVGASDKPDRPSYRVMKYLLDQ. . . . . . . GYH. . . VIPVSPKVAGKTLLGQQ. . . . . . . . . . . . . . .
Template Known Secondary structure 

..
S

S
TTS.......T

...
SSSTTSTT...............
Template Predicted Secondary structure 


..





.......

...








...............
Template SS confidence 















































































   7..10.... .....20.........30......... 40.. .......50.........
 
   533......540.........550.........560.........570.........580.........590.........600.........610..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  NLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAG
Query Conservation                   



 
        
  

  
 






   
       

   
        





 
Alig confidence  ....














































......






















Template Conservation  .... 
 

 


  





 

       
 
    
   
    
   ...... 
    
   

 





 

 
Template Sequence  . . . . GYATLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVIN. . . . . . EQAAVLAREAGLSVVMDRCPAIE
Template Known Secondary structure  ....

SSTTT
SS

S

S
STT



TT


......TTT

S

Template Predicted Secondary structure  ....



















......







Template SS confidence 















































































   60.........70.........80.........90.........100...... ...110.........120.........
 
   613.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  LP
Query Conservation 

Alig confidence 

Template Conservation    
Template Sequence  LP
Template Known Secondary structure  ST
Template Predicted Secondary structure 

Template SS confidence 

   130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions