Job Description P00561 Confidence 98.36% Date Thu Jan 5 10:56:43 GMT 2012 Rank 105 Aligned Residues 139 % Identity 19% Template c2axqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae Resolution 1.70 Å

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		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.							.	.	.	.	.	.	.	.	540
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	.	.	.	.	.	.	F	N	L	G	R	L	I	R	L
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.								.					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.								.					.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	L	L	L	G	S	G	F	V	A	Q	P	V	I	D	T	L	A	A	.	.	.	.	.	.	.	.	N	D	D	I	N	V	T	.	V	A	C	R	.	.	.	.	.	.	.	.	.	.	T	L	A	N	A	Q	A	L	A	K	P	S	G	S	K	A	I	S	L	D	V	T	D	D	S	A	L	D	K	V
Template Known Secondary structure									S	T	T										T	.	.	.	.	.	.	.	.	S	T	T					.				S	.	.	.	.	.	.	.	.	.	.	S									G	G	G	T								T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.								.					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.	.	30		.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	.	.	.	L	P	V	I	E
Query Conservation																																																																										.	.	.
Alig confidence							.	.	.	.																														.	.	.	.	.																														.	.	.
Template Conservation							.	.	.	.																														.	.	.	.	.
Template Sequence		L	A	D	N	D	.	.	.	.	V	V	I	S	L	I	P	Y	T	F	H	P	N	V	V	K	S	A	I	R	T	K	T	D	V	V	T	S	S	.	.	.	.	.	Y	I	S	P	A	L	R	E	L	E	P	E	I	V	K	A	G	I	T	V	M	N	E	I	G	L	D	P	G	I	D	H	L	Y	A	V	K
Template Known Secondary structure				T	S	S	.	.	.	.						S		G	G	G												T							S	.	.	.	.	.																	T						S		B	B	T	T	B
Template Predicted Secondary structure							.	.	.	.																														.	.	.	.	.
Template SS confidence
		65	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	Q	N	L	L	N	A	G	D	E	L	M	K	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	D	E	V	H	R	A	G	G	K	L	K	S	F	L
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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