Job Description P00561 Confidence 97.24% Date Thu Jan 5 10:56:43 GMT 2012 Rank 150 Aligned Residues 117 % Identity 15% Template c1k5hB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1-deoxy-d-xylulose-5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose-5-phosphate reductoisomerase Resolution 2.50 Å

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		467	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure									.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	F	V	I	G	V	.	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	.	.	.	.	.	.	.	H	F	R	V	V	A	L	V	A	G	K	.	.	.	.	.	.	.	.	.	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K
Template Known Secondary structure							T	T	T	S												T		T	T	.	.	.	.	.	.	.	T									S	S	.	.	.	.	.	.	.	.	.												T			S					S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
																533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																																							.	.	.
Template Conservation																															.	.																																							.	.	.
Template Sequence		T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	.	.	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	A	N	K	E	S	L	V	T	C	G	R	.	.	.	L	F	M	D	A	V	K	Q
Template Known Secondary structure						T	T	T								S								T	T		S	S			.	.								S	G	G	G										T	T								T									.	.	.
Template Predicted Secondary structure																															.	.																																							.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.
		599	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	R	K	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	A	Q	L	L
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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