Job Description P00561 Confidence 81.42% Date Thu Jan 5 10:56:43 GMT 2012 Rank 330 Aligned Residues 121 % Identity 17% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		V	V	G	V	V	G	T	G	H	I	G	Q	V	F	M	Q	I	M	E	.	.	.	.	.	.	.	.	.	G	F	G	A	K	V	I	T	Y	D	I	F	R	N	P	E	L	E	K	K	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N
Template Known Secondary structure									S												.	.	.	.	.	.	.	.	.		T	T								S	S								T	T		B		S										S						S				G	G	G	T	T		B	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
																				529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.													560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	P	F	N	L	G	R	L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		D	E	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S	R	G	P	L	V	D	T	D	A	V	I	R	G	L	D	S	G	K	I	F	G	.	Y	A	M	D	V	Y	E	G	E	V	G	I	F	N	E	D	W	E	G	K	E	F	P	D	A	R	L	A	D	L	I	A	R	P	N	V	L	V	T	P	K
Template Known Secondary structure								S		T	T							S		G	G	G	B												T	S				.				S			T	T		T	T	T	T	T	S			T	T	S			S											T	T					S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		T	A	F	Y	T	T	.	.	H	A	V	R	N	M	V	V	K	A	F	D	N
Template Known Secondary structure			T	T		S		.	.
Template Predicted Secondary structure								.	.
Template SS confidence
		298	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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