Job Description P00561 Confidence 94.91% Date Thu Jan 5 10:56:43 GMT 2012 Rank 204 Aligned Residues 98 % Identity 18% Template c1i32D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: leishmania mexicana glyceraldehyde-3-phosphate2 dehydrogenase in complex with inhibitors Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I	R	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																								.	.	.	.																	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																								.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		I	K	V	G	I	N	G	F	G	R	I	G	R	M	V	F	Q	A	I	C	D	Q	.	.	.	.	G	L	I	G	T	E	I	D	V	V	A	V	V	D	M	S	.	.	.	.	.	.	.	.	T	N	A	E	Y	F	A	Y	Q	M	K	H	D	T	V	H	G	R	P	K	Y	T	V	E	A	V	K	S	S	P
Template Known Secondary structure										S													T	.	.	.	.	T		B	T	T	T									S		.	.	.	.	.	.	.	.														T	T	T		S		S	S							S	S	T
Template Predicted Secondary structure																								.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
																			540	.	.	.	.	.	.	.									.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	K	E	Y	H	L	L	.	.	.	.	.	.	.	.	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	.	F	H	V	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		S	V	E	T	A	D	V	L	V	V	N	G	H	R	I	K	C	V	K	A	Q	R	N	P	A	D	L	P	W	G	K	L	G	V	D	Y	V	I	E	S	T	G	L	F	T	D	K	L	K	A	E	G	H	I	K	G	G	A	K	K	V	V
Template Known Secondary structure		T		S	S							T	T										S	S	G	G	G	S						T								S	S	S			B					T					T	T		S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions