Job Description P00561 Confidence 98.65% Date Thu Jan 5 10:56:43 GMT 2012 Rank 80 Aligned Residues 153 % Identity 16% Template c1h6dL_ PDB info PDB header:protein translocation Chain: L: PDB Molecule:precursor form of glucose-fructose PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.					.	.	.	.	.
Predicted Secondary structure																					.																																																				.	.	.	.
Query SS confidence																					.																																																				.	.	.	.
Query Sequence		T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	.	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	N	W	Q	E	E	L	A	Q	A	K	E	P	.	.	.	.	F	N	L	G	R
Query Conservation																					.																																																				.	.	.	.
Alig confidence																					.							.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	R	R	F	G	Y	A	I	V	G	L	G	K	Y	A	L	N	Q	I	L	P	G	F	A	G	.	.	.	.	.	.	.	.	C	Q	H	S	R	I	E	A	L	V	S	G	.	.	.	.	.	.	.	.	.	.	N	A	E	K	A	K	I	V	A	A	E	Y	G	V	D	P	R	K	I	Y	D	Y	S	N
Template Known Secondary structure														S						T					T	T	T	.	.	.	.	.	.	.	.		S	S									S	.	.	.	.	.	.	.	.	.	.												T	T			G	G	G				S	S	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I
Query Conservation
Alig confidence													.	.																												.	.																										.
Template Conservation													.	.																												.	.																										.
Template Sequence		F	D	K	I	A	K	D	P	K	I	D	.	.	A	V	Y	I	I	L	P	N	S	L	H	A	E	F	A	I	R	A	F	K	A	G	K	H	V	M	C	.	.	E	K	P	M	A	T	S	V	A	D	C	Q	R	M	I	D	A	A	K	A	A	N	K	K	L	.	M	I	G	Y	R	C	H	Y	D	P	M	N
Template Known Secondary structure		G	G	G	G	G	G		T	T			.	.						S		G	G	G											T	T						.	.		S	S			S	S															T				.					G	G	G	G
Template Predicted Secondary structure													.	.																												.	.																										.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.
		617	.	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		E	N	L	Q	N	L	L	N	A	G	D	.	.	E	L	M	K	F	S	G	I	L	S
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		R	A	A	V	K	L	I	R	E	N	Q	L	G	K	L	G	M	V	T	T	D	N	S
Template Known Secondary structure										T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions