Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence81.42%DateThu Jan 5 10:56:43 GMT 2012
Rank329Aligned Residues102
% Identity20%Templatec1gpjA_
PDB info PDB header:reductaseChain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   451........460.........470.........480.........490.........500.........510.........520....... ..
Predicted Secondary structure 


























.

Query SS confidence 












































































.

Query Sequence  GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQ. AK
Query Conservation 

  

  

 
   
 
 
 
 
 

  
   
      
        
  
  
   
    
            .  
Alig confidence 




































.........









..........










.

Template Conservation 


 

      
  
 






 

 
 
  
   .........
   
 
 

..........
  

  

   
 
Template Sequence  AAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDR. . . . . . . . . GVRAVLVANR. . . . . . . . . . TYERAVELARDLGG
Template Known Secondary structure  S

TT
S

.........

S
S..........ST
Template Predicted Secondary structure 










.........



..........



Template SS confidence 















































































   153......160.........170.........180......... 190......... 200.........210...
 
   530.........540.........550.........560 ........ .570.....
Predicted Secondary structure 
















......



Query SS confidence 






























. . .







. . .






Query Sequence  EPFNLGRLIRLVKEYHLLNPVIVDCTSSQAV. . . ADQYADFL. . . REGFHVV
Query Conservation                      



 
     ...   
  

...  
 


Alig confidence 















....










...







...






Template Conservation         
   
  

....





 
   

  
 
              
Template Sequence  EAVRFDELVDHLARSD. . . . VVVSATAAPHPVIHVDDVREALRKRDRRSPIL
Template Known Secondary structure 

GGGT
S....

SSSS

B

SS


Template Predicted Secondary structure 

....















Template SS confidence 



















































   214.....220......... 230.........240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions