Job Description P00561 Confidence 100.00% Date Thu Jan 5 10:56:43 GMT 2012 Rank 7 Aligned Residues 348 % Identity 32% Template c1ebuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine Resolution 2.60 Å

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		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.				520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		T	D	Q	V	I	E	V	F	V	I	G	V	G	G	V	G	G	A	L	L	E	Q	L	K	R	Q	Q	S	W	L	K	N	K	H	I	D	L	R	V	C	G	V	A	N	S	K	A	L	L	T	N	V	H	G	L	N	L	E	.	.	.	N	W	Q	E	E	L	A	Q	A	K	E	P	F	N	L	G	R	L	I
Query Conservation																																																												.	.	.
Alig confidence																												.	.	.	.	.																												.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		S	T	K	V	V	N	V	A	V	I	G	A	G	V	V	G	S	A	F	L	D	Q	L	L	A	M	.	.	.	.	.	K	S	T	I	T	Y	N	L	V	L	L	A	E	A	E	R	S	L	I	S	K	D	F	S	P	L	N	V	G	S	D	W	K	A	A	L	A	A	S	T	T	K	T	L	P	L	D	D	L
Template Known Secondary structure				S										S												T		.	.	.	.	.			S	S										S	S	B					T	T		S			T	T	T	T												B
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	K	E	Y	H	L	L	N	P	V	I	V	D	C	T	S	S	Q	A	V	A	D	Q	Y	A	D	F	L	R	E	G	F	H	V	V	T	P	N	K	K	A	N	T	S	S	M	D	Y	Y	H	Q	L	R	Y	A	A	E	K	S	R	R	K	F	L	Y	D	T	N	V	G	A	G	L	P	V	I	E	N
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		I	A	H	L	K	T	S	P	K	P	V	I	L	V	D	N	T	S	S	A	Y	I	A	G	F	Y	T	K	F	V	E	N	G	I	S	I	A	T	P	N	K	K	A	F	S	S	D	L	A	T	W	K	A	L	F	S	N	K	P	T	N	G	F	.	V	Y	H	E	A	T	V	G	A	G	L	P	I	I	S	F
Template Known Secondary structure						T	T		S	S								S							T	T							T	T									T	T	T	S	S		S							T	S			S	S	S			.				G	G	G	S	S	T	T	S	T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.					.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690		.	.	.
Predicted Secondary structure																																.	.	.	.																																											.
Query SS confidence																																.	.	.	.																																											.
Query Sequence		L	Q	N	L	L	N	A	G	D	E	L	M	K	F	S	G	I	L	S	G	S	L	S	Y	I	F	G	K	L	D	.	.	.	.	E	G	M	S	F	S	E	A	T	T	L	A	R	E	M	G	Y	T	E	P	D	P	R	D	D	L	S	G	M	D	V	A	R	K	L	L	I	L	A	R	E	T	.	G	R	E
Query Conservation																																.	.	.	.																																											.
Alig confidence																																.	.	.	.																																											.
Template Conservation
Template Sequence		L	R	E	I	I	Q	T	G	D	E	V	E	K	I	E	G	I	F	S	G	T	L	S	Y	I	F	N	E	F	S	T	S	Q	A	N	D	V	K	F	S	D	V	V	K	V	A	K	K	L	G	Y	T	E	P	D	P	R	D	D	L	N	G	L	D	V	A	R	K	V	T	I	V	G	R	I	S	G	V	E	V
Template Known Secondary structure									T																						S		S	S																T	T		S		S	S	T					T																T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750		.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	E	L	A	D	I	E	I	E	P	V	L	P	A	E	F	N	A	E	G	D	V	A	A	F	M	A	N	L	S	Q	L	D	D	L	F	A	A	R	V	A	K	A	R	D	E	G	K	V	L	R	Y	V	G	N	I	D	.	E	D	G	V	C	R	V	K	I	A	E	V	D	G	N	D	P	L	F	K	V	K
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		E	S	P	T	S	F	P	V	Q	S	L	I	P	K	P	L	E	S	V	K	S	A	D	E	F	L	E	K	L	S	D	Y	D	K	D	L	T	Q	L	K	K	E	A	A	T	E	N	K	V	L	R	F	I	G	K	V	D	V	A	T	K	S	V	S	V	G	I	E	K	Y	D	Y	S	H	P	F	A	S	L	K
Template Known Secondary structure				T	T	S	S		B				S		T	T	G	G	G			S	T	T							G	G	G														T	T											T	T	T	T											T	T	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	E	N	A	L	A	F	Y	S	H	Y	Y	Q	P	L	P	L	V	L	R	G	Y	G	A	G	N	D	V	T	A	A	G	V	F	A	D	L	L	R	T	L	S	W
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		G	S	D	N	V	I	S	I	K	T	K	R	Y	T	N	.	P	V	V	I	Q	G	A	G	A	G	A	A	V	T	A	A	G	V	L	G	D	V	I	K	I	A	Q	R
Template Known Secondary structure		T	T									S	S		S	S	.
Template Predicted Secondary structure																	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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