Return to main results Retrieve Phyre Job Id

Job DescriptionP00561
Confidence97.63%DateThu Jan 5 10:56:43 GMT 2012
Rank135Aligned Residues95
% Identity19%Templatec1cf2Q_
PDB info PDB header:oxidoreductaseChain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   466...470.........480.........490.........500....... ..510.........520.........530.....
Predicted Secondary structure 










..........















Query SS confidence 









































. . . . . . . . . .



























Query Sequence  IEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSK. . . . . . . . . . ALLTNVHGLNLENWQEELAQAKEPFNLG
Query Conservation 
 
 
 
 
 

  
   
      
        
  
  
 ..........  
    
                    
Alig confidence 






















........










..........



























Template Conservation   











 
 
 
   
........




 
            
     
 
             
 
     
Template Sequence  KAVAINGYGTVGKRVADAIAQQD. . . . . . . . DMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVD
Template Known Secondary structure 

STTST........TSS
STT

SSGGGTT



Template Predicted Secondary structure 





........


























Template SS confidence 















































































   2.......10.........20.... .....30.........40.........50.........60.........70...
 
   536...540.........550.........560.........570.....
Predicted Secondary structure 
















Query SS confidence 







































Query Sequence  RLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVV
Query Conservation                



 
        
  

  
 


Alig confidence 



.......




























Template Conservation      ....... 








   
 
     
  
 


Template Sequence  DMLD. . . . . . . EADIVIDCTPEGIGAKNLKMYKEKGIKAI
Template Known Secondary structure  .......T
S


TTT
Template Predicted Secondary structure 
.......












Template SS confidence 







































   74... ..80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions