Return to main results Retrieve Phyre Job Id

Job DescriptionP33020
Confidence96.34%DateThu Jan 5 11:50:55 GMT 2012
Rank164Aligned Residues61
% Identity23%Templated2p4wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF1790-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50. ........60...
Predicted Secondary structure 












...........





Query SS confidence 

















































. . . . . . . . . . .











Query Sequence  NNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKG. . . . . . . . . . . YILTEQEYCVVV
Query Conservation    

  
   
   
 
    

      
      
  
   
   
  ...........

      



Alig confidence 














.

































...........











Template Conservation     
  

  
    .    


  
  
   
  

  
   


         

    
 
       
 
Template Sequence  NETRRRILFLLTKRP. YFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKGLRLEIL
Template Known Secondary structure  SS
.T

TTS

BTTB



TT
Template Predicted Secondary structure 



.


















Template SS confidence 








































































   14.....20........ .30.........40.........50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions