Job Description P33020 Confidence 100.00% Date Thu Jan 5 11:50:55 GMT 2012 Rank 28 Aligned Residues 292 % Identity 14% Template d2dcna1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.25

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	C	V	V	V	G	T	I	N	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D	F	Y	G	E	M	L	L	E	E	T	R	R	A	G	V	N	V	S
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		A	K	L	I	T	L	G	E	I	L	I	E	F	N	A	.	.	.	.	L	S	P	G	P	L	R	H	V	S	Y	F	E	K	H	V	A	G	S	E	A	N	Y	C	V	A	F	I	K	Q	G	N	E	C	G	I	I	A	K	V	G	D	D	E	F	G	Y	N	A	I	E	W	L	R	G	Q	G	V	D	V	S
Template Known Secondary structure								S									.	.	.	.	S	S	S	S		G	G	G																						T	T											S	S													T	T		B		T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																																						.	.	.	.	.	.
Query SS confidence																							.	.	.																																						.	.	.	.	.	.
Query Sequence		G	C	V	R	L	H	G	Q	S	T	S	T	Y	L	A	I	A	N	R	D	D	.	.	.	Q	T	V	L	A	I	N	D	T	H	L	L	E	Q	L	T	P	Q	L	L	N	G	S	R	D	L	L	R	H	A	G	V	V	L	A	D	C	.	.	.	.	.	.	N	L	T	A	E	A	L	E	W	V	F	T	L
Query Conservation																							.	.	.																																						.	.	.	.	.	.
Alig confidence																							.	.	.																					.	.																.	.	.	.	.	.
Template Conservation																																														.	.
Template Sequence		H	M	K	I	D	P	S	A	P	T	G	I	F	F	I	Q	R	H	Y	P	V	P	L	K	S	E	S	I	Y	Y	R	K	G	S	A	G	S	K	L	S	P	E	D	V	.	.	D	E	E	Y	V	K	S	A	D	L	V	H	S	S	G	I	T	L	A	I	S	S	T	A	K	E	A	V	Y	K	A	F	E	I
Template Known Secondary structure		T					T	T	S										S		S	S	T	T									T	T		T	G	G	G			G	G	G		.	.						T	T		S											S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		209	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure					.	.																						.	.	.	.	.
Query SS confidence					.	.																						.	.	.	.	.
Query Sequence		A	D	E	.	.	I	P	V	F	V	D	T	V	S	E	F	K	A	G	K	I	K	H	W	L	A	.	.	.	.	.	H	I	H	T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L	P	D	E	S
Query Conservation					.	.																						.	.	.	.	.
Alig confidence					.	.																						.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		A	S	N	R	S	F	D	T	N	I	R	L	K	L	W	S	A	E	E	A	K	R	E	I	L	K	L	L	S	K	F	H	L	K	F	L	I	T	D	T	D	D	S	K	I	I	L	G	E	.	.	.	.	.	.	S	D	P	D	K	A	A	K	A	F	S	D	Y	A	E	I	I	V	M	K	L	G	P	K	G
Template Known Secondary structure			S	S									T	T	T	S																																	S		.	.	.	.	.	.											T	T	T										T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	C	S	E	K	D	G	E	Q	F	L	L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P	T	L	S	A	D	N	A	L	S	L	V	P	M
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		A	I	V	Y	Y	.	D	G	K	K	Y	Y	S	S	G	Y	Q	V	P	V	E	D	V	T	G	A	G	D	A	L	G	G	T	F	L	S	L	Y	Y	K	G	F	E	M	E	K	A	L	D	Y	A	I	V	A	S	T	L	N	V	M	I	R	G	D	Q	E	N	L	P	T	T	K	D	I	E	T	F	L	R	E
Template Known Secondary structure							.	T	T													S			T	T														T	T	T																		T	T	S	S	S	S	S	T	T
Template Predicted Secondary structure							.
Template SS confidence
		230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		362
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		309

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions