Job Description P33020 Confidence 100.00% Date Thu Jan 5 11:50:55 GMT 2012 Rank 30 Aligned Residues 298 % Identity 19% Template d2ajra1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.46

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure											.	.																.	.	.
Query SS confidence											.	.																.	.	.
Query Sequence		Y	C	V	V	V	G	T	I	N	.	.	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	.	.	.	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D	F	Y	G	E	M	L	L	E	E	T	R	R	A	G
Query Conservation											.	.																.	.	.
Alig confidence							.				.	.																.	.	.																																						.
Template Conservation							.																																																													.
Template Sequence		X	V	L	T	V	.	T	L	N	P	A	L	D	R	E	I	F	I	E	D	F	Q	V	N	R	L	Y	R	I	N	D	L	S	K	T	Q	X	S	P	G	G	K	G	I	N	V	S	I	A	L	S	K	L	G	V	P	S	V	A	T	G	F	V	G	G	Y	.	X	G	K	I	L	V	E	E	L	R	K	I	S
Template Known Secondary structure							.		S	S										T	T			S	S							S	G	G	G							S												T	T													.
Template Predicted Secondary structure							.																																																													.
Template SS confidence
		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																											.	.	.	.
Query SS confidence																																									.	.																											.	.	.	.
Query Sequence		V	N	V	S	G	C	V	R	L	H	G	Q	S	T	S	T	Y	L	A	I	A	N	R	D	D	Q	T	V	L	A	I	N	D	T	H	L	L	E	Q	.	.	L	T	P	Q	L	L	N	G	S	R	D	L	L	R	H	A	G	V	V	L	A	D	C	N	L	T	.	.	.	.	A	E	A	L	E	W	V	F	T
Query Conservation																																									.	.																											.	.	.	.
Alig confidence																																									.	.																											.	.	.	.
Template Conservation
Template Sequence		K	L	I	T	T	N	F	V	Y	V	E	G	E	T	R	E	N	I	E	I	I	D	E	K	N	K	T	I	T	A	I	N	F	P	G	P	D	V	T	D	X	D	V	N	H	F	L	R	R	Y	K	X	T	L	S	K	V	D	C	V	V	I	S	G	S	I	P	P	G	V	N	E	G	I	C	N	E	L	V	R
Template Known Secondary structure		T	T									S	S											T	T	T	T																													T	T		S						S				T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		208	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure					.	.																															.
Query SS confidence					.	.																															.
Query Sequence		L	A	D	.	.	E	I	P	V	F	V	D	T	V	S	E	F	K	A	G	K	I	K	H	W	L	A	H	I	H	T	L	K	P	T	.	L	P	E	L	E	I	L	W	G	Q	A	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L	P	D	E	S	V	Y	C
Query Conservation					.	.																															.
Alig confidence					.	.									.																						.																															.
Template Conservation															.																																																					.
Template Sequence		L	A	R	E	R	G	V	F	V	F	V	E	Q	.	T	P	R	L	L	E	R	I	Y	E	G	P	E	F	P	N	V	V	K	P	D	L	R	G	N	H	A	S	F	L	G	V	D	L	K	T	F	D	D	Y	V	K	L	A	E	K	L	A	E	K	S	Q	.	V	S	V	V	S	Y	E	V	K	N	D	I	V
Template Known Secondary structure						T	T								.											S	S				S							T	T			S		B	T	T	B				S															S	S	.							T	T	T
Template Predicted Secondary structure															.																																																					.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		S	E	K	D	G	E	Q	F	L	L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	.	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P	T	L	S	A	D	N	A	L	S	L	V	P	M	V
Query Conservation																																						.
Alig confidence																																						.																									.	.
Template Conservation																																																															.	.
Template Sequence		A	T	R	E	G	V	W	L	I	R	S	K	E	E	I	D	T	S	H	L	L	G	A	G	D	A	Y	V	A	G	X	V	Y	Y	F	I	K	H	G	A	N	F	L	E	X	A	K	F	G	F	A	S	A	L	A	A	T	R	R	K	E	.	.	K	Y	X	P	D	L	E	A	I	K	K	E	Y	D	H	F
Template Known Secondary structure				S	S								S	S				G	G	G		T	T																		S																	T	T	S	S	S	.	.											T	T	G	G	G
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions