Return to main results Retrieve Phyre Job Id

Job DescriptionP33020
Confidence96.96%DateThu Jan 5 11:50:55 GMT 2012
Rank107Aligned Residues51
% Identity4%Templated1z6ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50....
Predicted Secondary structure 












Query SS confidence 


















































Query Sequence  REKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYIL
Query Conservation 

  
   
   
 
    

      
      
  
   
   
  

 
Alig confidence 


















































Template Conservation 
   

  
   
  

 


  



  


 

 

   


 
 
   
Template Sequence  NAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEXLEAHLVQELGLVV
Template Known Secondary structure  SS
S

TT

TS

Template Predicted Secondary structure 














Template SS confidence 


















































   17..20.........30.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions