Job Description P33020 Confidence 84.63% Date Thu Jan 5 11:50:55 GMT 2012 Rank 338 Aligned Residues 40 % Identity 30% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure																									.	.	.			.	.	.	.	.	.	.
Query SS confidence																									.	.	.			.	.	.	.	.	.	.
Query Sequence		E	K	E	I	L	A	I	L	R	R	N	P	L	I	Q	Q	N	E	I	A	D	M	L	.	.	.	Q	I	.	.	.	.	.	.	.	S	R	S	R	V	A	A	H	I	M	D	L	M	R	K
Query Conservation																									.	.	.			.	.	.	.	.	.	.
Alig confidence																									.	.	.			.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	K	I	A	Q	Y	K	Q	E	C	P	S	I	F	A	W	E	I	R	D	R	L	L	S	E	G	V	C	T	N	D	N	I	P	S	V	S	S	I	N	R	V	L	R	N	L	A	S	E
Template Known Secondary structure													T	T													T	T	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions