Job Description P33020 Confidence 96.63% Date Thu Jan 5 11:50:55 GMT 2012 Rank 143 Aligned Residues 102 % Identity 26% Template c3v4gA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6 Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																											.	.	.	.	.		.																					.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.		.																					.	.	.	.	.	.
Query Sequence		N	R	E	K	E	I	L	A	I	L	R	R	N	P	L	I	Q	Q	N	E	I	A	D	M	L	.	.	.	.	.	Q	.	I	S	R	S	R	V	A	A	H	I	M	D	L	M	R	K	G	R	I	K	.	.	.	.	.	.	G	K	G	Y	I	L	T	E	Q	E	Y	C	V	V	V	G	T	I	N	M	D	I
Query Conservation																											.	.	.	.	.		.																					.	.	.	.	.	.
Alig confidence																											.	.	.	.	.		.														.	.	.					.	.	.	.	.	.													.	.
Template Conservation																																															.	.	.																							.	.
Template Sequence		N	L	V	R	A	F	K	A	L	L	K	E	E	R	F	G	S	Q	G	E	I	V	E	A	L	K	Q	E	G	F	E	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	.	.	.	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	T	V	S	S	S	.	.	L	R	E	L	V	L	D	V
Template Known Secondary structure														T				S											T	T		T	T													T	.	.	.	T							T	T	S									T	T			.	.	T	G	G	G
Template Predicted Secondary structure																																															.	.	.																							.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.	.	.	.	.	.	.	.																		.
Template Sequence		D	.	.	.	.	.	.	.	.	.	H	N	Q	A	L	V	V	I	H	T	G	P	G	A	A	Q	L	.	I	A	R	M	L	D	S	L	G	K	S	E	G	I	L	G	V	V	A	G	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.			S	S							S	T	T					.										G	G	G	T								S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions