 |
Job Description | P33020 | Confidence | 45.33% | Date | Thu Jan 5 11:50:55 GMT 2012 |
Rank | 482 | Aligned Residues | 143 |
% Identity | 12% | Template | c3q3vA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:phosphoglycerate kinase; |
PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni.
|
Resolution | 2.15 Å |
|
 |
  |   |
41 | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | R | K | G | R | I | . |
K | G | K | G | Y | I | L | T | E | Q | E | Y | C | V | V | V | G | T | I | N | M | D | I | R | G | M | A | D | I | R | Y | P | Q | S | A | S | H | P | G | T | I | H | C | S | A | G | G | V | G | R | N | I | A | H | N | L | A | L | L | G | R | D | V | H | L | L | S | V | I | G | D | D |
Query Conservation |   |
|   |   |   |
|   |   | . |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|   |
|   | . | . | . | . | . |
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|
|   |
|
|   |
|   |   |   |   | . |
Template Sequence |   |
L | L | Q | K | E | I | D | F | A | S | N | L | I | K | H | P | A | R | P | F | V | A | V | V | G | G | S | K | V | S | G | K | L | Q | A | L | T | N | L | L | P | K | V | D | K | . |
. |
. |
. |
. |
L | I | I | G | G | G | X | A | F | T | F | L | K | A | L | G | Y | D | I | G | N | S | L | L | E | E | E | L | L | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |  | . | . | . | . | . |  |  |  |
| S | T | T |  |  |  |  |  |  |  | T | T |
|
|
| T | T | S |
|
|
| G | G | G |  | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Y | G | E | M | L | L | E | E | T | R | R | A | G | V | N | V | . |
. |
. |
. |
S | G | C | V | R | L | H | G | Q | S | T | S | T | Y | L | A | I | A | N | R | D | D | Q | T | V | L | A | I | N | D | T | H | L | L | E | Q | L | T | P | Q | L | L | N | G | S | R | D | L | L | R | H | A | G | V | V | L | A | D | C |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|
Template Sequence |   |
E | E | A | N | K | I | L | T | K | G | K | N | L | G | V | K | I | Y | L | P | V | D | V | V | A | A | P | A | C | S | Q | D | V | P | X | K | F | V | P | A | Q | E | . |
. |
. |
. |
. |
. |
I | P | N | G | W | X | G | L | D | I | G | P | A | S | V | R | L | F | K | E | V | I | S | D | A | Q | T | I | W | W | N | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
|
| S |  |  |  |  |  | S | S | S | S | T | T | S |
|
|  |  |  |  | G | G | G | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|